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Report for CCDS75212.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75212.1 Public Homo sapiens 4 PRIMPOL 24 110 108 CCDS HistoryNCBI Gene:201973Re-query CCDS DB by CCDS ID:75212.1Re-query CCDS DB by GeneID:201973See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75212.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000515774.5 ENSP00000421913.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000515774.5Link to Ensembl Protein Viewer:ENSP00000421913.1Re-query CCDS DB by Nucleotide ID:ENST00000515774Re-query CCDS DB by Protein ID:ENSP00000421913
Original member Current member NCBI NM_001300767.2 NP_001287696.1 Accepted alive Link to Nucleotide Sequence:NM_001300767.2Link to Protein Sequence:NP_001287696.1Re-query CCDS DB by Nucleotide ID:NM_001300767Re-query CCDS DB by Protein ID:NP_001287696Link to BLAST:NP_001287696.1

Chromosomal Locations for CCDS 75212.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 184661883 184661903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 184665917 184666064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 184672173 184672460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 184678232 184678394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 184682248 184682336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 184685409 184685498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 184685576 184685684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 184691499 184691581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 184691666 184691712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 184694522 184694779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1296 nt):
ATGGTTGCATTACTCATTGAGTATGTGTGTAAAGCACTTCAAGAGTTATACGGTGTTAATTGCTCAGCTG
AAGATGTTTTGAACTTGGATTCTAGCACTGATGAAAAATTCAGCCGGCATTTAATATTTCAGCTCCATGA
TGTGGCATTTAAAGATAATATTCATGTTGGTAATTTTTTGAGAAAAATTTTGCAGCCTGCTCTTGACTTG
CTTGGCAGTGAAGATGATGATAGCGCTCCAGAGACAACAGGCCATGGATTTCCCCATTTTTCAGAAGCAC
CTGCAAGACAAGGATTTTCTTTCAATAAAATGTTCACAGAAAAGGCTACAGAGGAAAGCTGGACATCGAA
TTCAAAGAAACTGGAGAGGCTGGGGTCAGCTGAGCAAAGCAGTCCTGACCTTTCATTTCTAGTTGTGAAG
AATAACATGGGAGAGAAGCATCTTTTTGTAGATCTCGGAGTTTATACAAGAAATAGAAACTTTCGGCTAT
ATAAATCATCAAAAATTGGAAAGCGTGTGGCTTTGGAGGTTACTGAAGATAACAAATTTTTTCCTATACA
GTCAAAAGATGTTTCTGACGAATATCAATATTTTCTCTCTTCTTTGGTCAGCAATGTCAGGTTCTCAGAT
ACTTTACGAATTCTTACATGTGAGCCATCTCAGAATAAACAAAAAGGAGTTGGATATTTTAACAGTATCG
GCACTTCAGTAGAAACCATTGAAGGTTTTCAGTGTTCTCCCTATCCTGAAGTTGATCATTTTGTTCTTTC
TTTGGTGAATAAAGATGGCATTAAAGGAGGAATTCGGCGTTGGAACTACTTTTTCCCAGAAGAATTACTG
GTTTATGATATTTGTAAATATCGGTGGTGTGAAAACATTGGAAGAGCCCATAAGAGTAATAATATAATGA
TTCTGGTTGATCTGAAAAATGAAGTTTGGTATCAAAAATGTCATGACCCTGTATGTAAAGCAGAAAACTT
CAAATCTGACTGTTTCCCATTACCTGCTGAAGTATGTCTCCTGTTTCTTTTCAAAGAGGAAGAAGAGTTT
ACAACAGATGAAGCAGATGAAACTAGGAGCAATGAAACCCAGAATCCTCATAAACCATCACCTAGCAGGC
TGTCAACAGGTGCATCTGCTGATGCTGTCTGGGATAATGGCATTGATGATGCTTATTTTTTAGAAGCTAC
TGAAGATGCTGAATTAGCTGAAGCTGCAGAGAACAGTCTTCTCAGTTATAACAGTGAAGTGGATGAAATT
CCTGATGAACTAATTATAGAAGTATTACAAGAGTAA

Translation (431 aa):
MVALLIEYVCKALQELYGVNCSAEDVLNLDSSTDEKFSRHLIFQLHDVAFKDNIHVGNFLRKILQPALDL
LGSEDDDSAPETTGHGFPHFSEAPARQGFSFNKMFTEKATEESWTSNSKKLERLGSAEQSSPDLSFLVVK
NNMGEKHLFVDLGVYTRNRNFRLYKSSKIGKRVALEVTEDNKFFPIQSKDVSDEYQYFLSSLVSNVRFSD
TLRILTCEPSQNKQKGVGYFNSIGTSVETIEGFQCSPYPEVDHFVLSLVNKDGIKGGIRRWNYFFPEELL
VYDICKYRWCENIGRAHKSNNIMILVDLKNEVWYQKCHDPVCKAENFKSDCFPLPAEVCLLFLFKEEEEF
TTDEADETRSNETQNPHKPSPSRLSTGASADAVWDNGIDDAYFLEATEDAELAEAAENSLLSYNSEVDEI
PDELIIEVLQE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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