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Report for CCDS75409.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75409.1 Public Homo sapiens 6 KIAA0319 24 110 108 CCDS HistoryNCBI Gene:9856Re-query CCDS DB by CCDS ID:75409.1Re-query CCDS DB by GeneID:9856See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 75409.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000616673.4 ENSP00000483665.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000616673.4Link to Ensembl Protein Viewer:ENSP00000483665.1Re-query CCDS DB by Nucleotide ID:ENST00000616673Re-query CCDS DB by Protein ID:ENSP00000483665
Original member Current member NCBI NM_001252328.2 NP_001239257.1 Accepted alive Link to Nucleotide Sequence:NM_001252328.2Link to Protein Sequence:NP_001239257.1Re-query CCDS DB by Nucleotide ID:NM_001252328Re-query CCDS DB by Protein ID:NP_001239257Link to BLAST:NP_001239257.1

Chromosomal Locations for CCDS 75409.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 24547165 24547343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24551434 24551525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24554541 24554631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24556607 24556729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24559013 24559155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24563359 24563518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24564202 24564340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24566597 24566748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24568781 24568929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24569903 24570035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24572575 24572659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24576368 24576373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1452 nt):
ATGCAGGAAGGAGATTATACATTTCAGCTGAAGGTGACAGATTCTTCAAGGCAACAGTCTACTGCTGTGG
TGACTGTGATTGTCCAGCCTGAAAACAATAGACCTCCAGTGGCTGTGGCCGGCCCTGATAAAGAGCTGAT
CTTCCCAGTGGAAAGTGCTACCCTGGATGGGAGCAGCAGCAGCGATGACCACGGCATTGTCTTCTACCAC
TGGGAGCACGTCAGAGGCCCCAGTGCAGTGGAGATGGAAAATATTGACAAAGCAATAGCCACTGTGACTG
GTCTCCAGGTGGGGACCTACCACTTCCGTTTGACAGTGAAAGACCAGCAGGGACTGAGCAGCACGTCCAC
CCTCACTGTGGCTGTGAAGAAGGAAAATAATAGTCCTCCCAGAGCCCGGGCTGGTGGCAGACATGTTCTT
GTGCTTCCCAATAATTCCATTACTTTGGATGGTTCAAGGTCTACTGATGACCAAAGAATTGTGTCCTATC
TGTGGATCCGGGATGGCCAGAGTCCAGCAGCTGGAGATGTCATCGATGGCTCTGACCACAGTGTGGCTCT
GCAGCTTACGAATCTGGTGGAGGGGGTGTACACTTTCCACTTGCGAGTCACCGACAGTCAGGGGGCCTCG
GACACAGACACTGCCACTGTGGAAGTGCAGCCAGACCCTAGGAAGAGTGGCCTGGTGGAGCTGACCCTGC
AGGTTGGTGTTGGGCAGCTGACAGAGCAGCGGAAGGACACCCTTGTGAGGCAGCTGGCTGTGCTGCTGAA
CGTGCTGGACTCGGACATTAAGGTCCAGAAGATTCGGGCCCACTCGGATCTCAGCACCGTGATTGTGTTT
TATGTACAGAGCAGGCCGCCTTTCAAGGTTCTCAAAGCTGCTGAAGTGGCCCGAAATCTGCACATGCGGC
TCTCAAAGGAGAAGGCTGACTTCTTGCTTTTCAAGGTCTTGAGGGTTGATACAGCAGGTTGCCTTCTGAA
GTGTTCTGGCCATGGTCACTGCGACCCCCTCACAAAGCGCTGCATTTGCTCTCACTTATGGATGGAGAAC
CTTATACAGCGTTATATCTGGGATGGAGAGAGCAACTGTGAGTGGAGTATATTCTATGTGACAGTGTTGG
CTTTTACTCTTATTGTGCTAACAGGAGGTTTCACTTGGCTTTGCATCTGCTGCTGCAAAAGACAAAAAAG
GACTAAAATCAGGAAAAAAACAAAGTACACCATCCTGGATAACATGGATGAACAGGAAAGAATGGAACTG
AGGCCCAAATATGGTATCAAGCACCGAAGCACAGAGCACAACTCCAGCCTGATGGTATCCGAGTCTGAGT
TTGACAGTGACCAGGACACAATCTTCAGCCGAGAAAAGATGGAGAGAGGGAATCCAAAGGTTTCCATGAA
TGGTTCCATCAGAAATGGAGCTTCCTTCAGTTATTGCTCAAAGGACAGATAA

Translation (483 aa):
MQEGDYTFQLKVTDSSRQQSTAVVTVIVQPENNRPPVAVAGPDKELIFPVESATLDGSSSSDDHGIVFYH
WEHVRGPSAVEMENIDKAIATVTGLQVGTYHFRLTVKDQQGLSSTSTLTVAVKKENNSPPRARAGGRHVL
VLPNNSITLDGSRSTDDQRIVSYLWIRDGQSPAAGDVIDGSDHSVALQLTNLVEGVYTFHLRVTDSQGAS
DTDTATVEVQPDPRKSGLVELTLQVGVGQLTEQRKDTLVRQLAVLLNVLDSDIKVQKIRAHSDLSTVIVF
YVQSRPPFKVLKAAEVARNLHMRLSKEKADFLLFKVLRVDTAGCLLKCSGHGHCDPLTKRCICSHLWMEN
LIQRYIWDGESNCEWSIFYVTVLAFTLIVLTGGFTWLCICCCKRQKRTKIRKKTKYTILDNMDEQERMEL
RPKYGIKHRSTEHNSSLMVSESEFDSDQDTIFSREKMERGNPKVSMNGSIRNGASFSYCSKDR


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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