NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS75414.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75414.1 Public Homo sapiens 6 ZSCAN26 24 110 108 CCDS HistoryNCBI Gene:7741Re-query CCDS DB by CCDS ID:75414.1Re-query CCDS DB by GeneID:7741See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75414.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000614088.1 ENSP00000479314.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000614088.1Link to Ensembl Protein Viewer:ENSP00000479314.1Re-query CCDS DB by Nucleotide ID:ENST00000614088Re-query CCDS DB by Protein ID:ENSP00000479314
Original member Current member EBI ENST00000316606.10 ENSP00000484931.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000316606.10Link to Ensembl Protein Viewer:ENSP00000484931.1Re-query CCDS DB by Nucleotide ID:ENST00000316606Re-query CCDS DB by Protein ID:ENSP00000484931
Original member Current member NCBI NM_001287421.2 NP_001274350.1 Accepted alive Link to Nucleotide Sequence:NM_001287421.2Link to Protein Sequence:NP_001274350.1Re-query CCDS DB by Nucleotide ID:NM_001287421Re-query CCDS DB by Protein ID:NP_001274350Link to BLAST:NP_001274350.1
Original member Current member NCBI NM_152736.6 NP_689949.3 Accepted alive Link to Nucleotide Sequence:NM_152736.6Link to Protein Sequence:NP_689949.3Re-query CCDS DB by Nucleotide ID:NM_152736Re-query CCDS DB by Protein ID:NP_689949Link to BLAST:NP_689949.3

Chromosomal Locations for CCDS 75414.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 28271920 28271934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 28272670 28272787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 28276195 28277096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1035 nt):
ATGGCAACAGCATTGGACCCAGACCAGCCAAAGAAACAAAAAATACTTGTGGAGGAGATGGCCCCTCTGA
AAGGAGTACAGGAACAGCAGGTTCGGCATGAGTGTGAAGTTACAAAGCCTGAGAAAGAGAAGGGTGAGGA
GACAAGGATTGAGAATGGGAAGCTTATTGTAGTAACAGACTCTTGTGGAAGAGTAGAGTCATCTGGGAAA
ATATCTGAACCCATGGAGGCTCATAATGAGGGCTCTAACTTGGAAAGGCATCAGGCCAAGCCCAAAGAGA
AGATTGAGTATAAATGCTCAGAACGTGAGCAGAGATTCATCCAGCACTTGGACCTGATTGAACATGCGAG
TACACACACGGGAAAGAAACTCTGCGAGTCTGATGTGTGTCAGAGTTCCAGTCTTACAGGACATAAGAAA
GTCCTCTCTAGAGAGAAAGGTCATCAGTGTCATGAGTGTGGGAAAGCCTTTCAGAGGAGTTCACACCTCG
TCAGACATCAGAAAATCCATCTTGGTGAGAAGCCTTATCAGTGCAATGAGTGTGGCAAAGTCTTTAGCCA
GAATGCAGGCCTTTTGGAACATCTCAGAATTCATACTGGAGAGAAACCTTATCTATGTATCCATTGTGGA
AAAAATTTTAGGCGCAGCTCTCACCTTAATCGACATCAGAGAATTCACAGTCAGGAGGAGCCCTGTGAGT
GCAAGGAGTGTGGAAAAACCTTTAGTCAGGCCTTACTCCTCACCCACCATCAGAGAATCCATAGTCACTC
CAAAAGCCATCAATGTAACGAGTGTGGAAAAGCTTTCAGTTTGACCTCAGACCTTATTCGACACCACAGA
ATTCATACTGGAGAAAAACCTTTCAAGTGTAACATATGCCAGAAAGCCTTCCGACTAAACTCACACCTTG
CTCAGCATGTAAGAATCCACAATGAAGAAAAACCCTATCAGTGTAGTGAATGTGGAGAAGCCTTCAGGCA
AAGGTCAGGTCTTTTTCAACATCAGAGATATCACCACAAAGACAAACTGGCTTGA

Translation (344 aa):
MATALDPDQPKKQKILVEEMAPLKGVQEQQVRHECEVTKPEKEKGEETRIENGKLIVVTDSCGRVESSGK
ISEPMEAHNEGSNLERHQAKPKEKIEYKCSEREQRFIQHLDLIEHASTHTGKKLCESDVCQSSSLTGHKK
VLSREKGHQCHECGKAFQRSSHLVRHQKIHLGEKPYQCNECGKVFSQNAGLLEHLRIHTGEKPYLCIHCG
KNFRRSSHLNRHQRIHSQEEPCECKECGKTFSQALLLTHHQRIHSHSKSHQCNECGKAFSLTSDLIRHHR
IHTGEKPFKCNICQKAFRLNSHLAQHVRIHNEEKPYQCSECGEAFRQRSGLFQHQRYHHKDKLA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH