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Report for CCDS75555.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75555.1 Public Homo sapiens 6 FAM120B 24 110 108 CCDS HistoryNCBI Gene:84498Re-query CCDS DB by CCDS ID:75555.1Re-query CCDS DB by GeneID:84498See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75555.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000537664.5 ENSP00000440125.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000537664.5Link to Ensembl Protein Viewer:ENSP00000440125.1Re-query CCDS DB by Nucleotide ID:ENST00000537664Re-query CCDS DB by Protein ID:ENSP00000440125
Original member Current member NCBI NM_001286380.2 NP_001273309.1 Accepted alive Link to Nucleotide Sequence:NM_001286380.2Link to Protein Sequence:NP_001273309.1Re-query CCDS DB by Nucleotide ID:NM_001286380Re-query CCDS DB by Protein ID:NP_001273309Link to BLAST:NP_001273309.1

Chromosomal Locations for CCDS 75555.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 170295406 170295453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 170317370 170319124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 170323079 170323259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 170330449 170330550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 170348151 170348323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 170358226 170358318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 170388287 170388493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 170391013 170391121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 170395487 170395579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 170404550 170404590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2802 nt):
ATGTTTGGACCTCGAGGCTCCACCAGCGCTGGCGCAGGCAGGAAGGAGATCCTTTCCCGGAGTTCAGTTA
TGGGTGTGAGAGGTTTGCAAGGATTTGTGGGAAGTACCTGCCCACATATATGTACAGTAGTAAATTTCAA
AGAACTGGCAGAGCACCACCGAAGCAAGTATCCTGGATGTACCCCTACCATTGTGGTTGATGCCATGTGT
TGTCTCAGATATTGGTATACTCCAGAATCTTGGATCTGCGGTGGCCAGTGGCGAGAATACTTTTCTGCTT
TGCGAGATTTTGTTAAAACTTTTACGGCAGCTGGGATCAAGTTGATATTCTTCTTTGATGGCATGGTGGA
GCAGGATAAGAGAGATGAATGGGTGAAACGAAGGCTCAAGAACAACAGGGAGATATCCAGGATTTTTCAT
TACATCAAGTCACACAAGGAGCAGCCAGGCAGAAATATGTTCTTCATCCCCTCAGGGCTAGCTGTGTTTA
CACGATTTGCTCTAAAGACACTGGGCCAGGAAACTTTGTGTTCTTTGCAGGAAGCAGATTATGAGGTAGC
TTCCTATGGCCTCCAGCATAACTGTCTTGGGATTCTGGGGGAAGACACTGATTACCTAATCTATGACACT
TGTCCCTACTTTTCAATTAGCGAGCTCTGCCTAGAGAGCCTGGACACCGTCATGCTCTGCAGAGAGAAGC
TCTGTGAGAGTCTGGGCCTCTGTGTGGCCGACCTTCCTCTTCTGGCCTGCCTCCTTGGCAACGACATAAT
CCCAGAGGGCATGTTTGAAAGCTTTAGGTACAAATGCTTATCGTCCTACACCTCTGTAAAAGAGAACTTT
GACAAAAAAGGTAACATCATATTAGCTGTGTCAGACCATATATCGAAAGTTCTTTACTTGTATCAAGGTG
AGAAAAAATTAGAAGAGATATTACCTCTGGGACCAAACAAAGCTCTTTTTTATAAAGGAATGGCATCATA
TCTTTTACCAGGACAAAAATCTCCATGGTTTTTCCAAAAACCCAAAGGTGTAATAACTTTGGACAAACAA
GTAATATCCACGAGTTCAGACGCCGAATCCAGGGAAGAAGTTCCCATGTGTTCAGATGCTGAATCCAGGC
AAGAAGTTCCCATGTGTACAGGCCCTGAATCCAGGCGAGAAGTTCCCGTGTATACAGATTCTGAACCCAG
GCAAGAAGTTCCCATGTGTTCAGACCCTGAACCCAGGCAAGAAGTTCCCACGTGTACAGGCCCTGAATCC
AGGCGAGAAGTTCCCATGTGTTCAGACCCTGAACCCAGGCAAGAAGTTCCCATGTGTACAGGCCCTGAAG
CCAGGCAAGAAGTTCCCATGTATACAGACTCTGAACCCAGGCAAGAAGTTCCCATGTATACAGACTCTGA
ACCCAGGCAAGAAGTTCCCATGTATACAGGCTCTGAACCCAGGCAAGAAGTTCCCATGTATACAGGCCCT
GAATCCAGGCAAGAAGTTCCCATGTATACAGGCCCTGAATCCAGGCAAGAAGTTTTAATACGGACAGACC
CTGAATCTAGGCAAGAAATTATGTGTACAGGCCATGAATCCAAACAGGAAGTTCCCATATGTACAGATCC
TATATCCAAGCAAGAAGACTCCATGTGTACACACGCTGAAATCAATCAAAAATTACCTGTAGCAACAGAT
TTTGAATTTAAGCTAGAAGCTCTCATGTGTACAAACCCTGAAATTAAACAAGAAGACCCCACAAATGTGG
GGCCTGAAGTAAAGCAACAAGTAACCATGGTTTCAGACACTGAAATCTTAAAGGTTGCTAGAACACATCA
CGTCCAAGCAGAAAGCTACCTGGTGTACAACATCATGAGCAGTGGAGAGATTGAATGCAGCAACACCCTA
GAAGATGAGCTTGACCAGGCCTTACCCAGCCAGGCCTTCATTTACCGTCCCATTCGACAGCGGGTCTACT
CACTCTTACTGGAGGACTGTCAAGATGTCACCAGCACCTGCCTAGCTGTCAAGGAGTGGTTTGTGTATCC
TGGGAACCCACTGAGGCACCCGGACCTCGTCAGGCCGCTGCAGATGACCATTCCAGGGGGAACGCCTAGT
TTGAAAATATTATGGCTGAACCAAGAGCCAGAAATACAGGTTCGGCGCTTGGACACACTCCTAGCCTGTT
TCAATCTTTCCTCCTCAAGAGAAGAGCTGCAGGCTGTCGAAAGCCCATTTCAAGCTTTGTGCTGCCTCTT
GATCTACCTCTTTGTCCAGGTGGACACGCTTTGCCTGGAGGATTTGCATGCGTTTATTGCGCAGGCCTTG
TGCCTCCAAGGAAAATCCACCTCGCAGCTTGTAAATCTACAGCCTGATTACATCAACCCCAGAGCCGTGC
AGCTGGGCTCCCTTCTCGTCCGCGGCCTCACCACTCTGGTTTTAGTCAACAGCGCATGTGGCTTCCCCTG
GAAGACGAGTGATTTCATGCCCTGGAATGTATTTGACGGGAAGCTTTTTCATCAGAAGTACTTGCAATCT
GAAAAGGGTTATGCTGTGGAGGTTCTTTTAGAACAAAATAGATCTCGGCTCACCAAATTCCACAACCTGA
AGGCAGTCGTCTGCAAGGCCTGCATGAAGGAGAACAGACGCATCACTGGCCGAGCCCACTGGGGCTCACA
CCACGCAGGGAGGTGGGGAAGACAGGGCTCCAGCTACCACAGGACGGGCTCTGGGTATAGCCGTTCCAGT
CAGGGACAGCCGTGGAGAGACCAGGGACCAGGAAGCAGACAGTATGAGCATGACCAGTGGAGAAGGTACT
AG

Translation (933 aa):
MFGPRGSTSAGAGRKEILSRSSVMGVRGLQGFVGSTCPHICTVVNFKELAEHHRSKYPGCTPTIVVDAMC
CLRYWYTPESWICGGQWREYFSALRDFVKTFTAAGIKLIFFFDGMVEQDKRDEWVKRRLKNNREISRIFH
YIKSHKEQPGRNMFFIPSGLAVFTRFALKTLGQETLCSLQEADYEVASYGLQHNCLGILGEDTDYLIYDT
CPYFSISELCLESLDTVMLCREKLCESLGLCVADLPLLACLLGNDIIPEGMFESFRYKCLSSYTSVKENF
DKKGNIILAVSDHISKVLYLYQGEKKLEEILPLGPNKALFYKGMASYLLPGQKSPWFFQKPKGVITLDKQ
VISTSSDAESREEVPMCSDAESRQEVPMCTGPESRREVPVYTDSEPRQEVPMCSDPEPRQEVPTCTGPES
RREVPMCSDPEPRQEVPMCTGPEARQEVPMYTDSEPRQEVPMYTDSEPRQEVPMYTGSEPRQEVPMYTGP
ESRQEVPMYTGPESRQEVLIRTDPESRQEIMCTGHESKQEVPICTDPISKQEDSMCTHAEINQKLPVATD
FEFKLEALMCTNPEIKQEDPTNVGPEVKQQVTMVSDTEILKVARTHHVQAESYLVYNIMSSGEIECSNTL
EDELDQALPSQAFIYRPIRQRVYSLLLEDCQDVTSTCLAVKEWFVYPGNPLRHPDLVRPLQMTIPGGTPS
LKILWLNQEPEIQVRRLDTLLACFNLSSSREELQAVESPFQALCCLLIYLFVQVDTLCLEDLHAFIAQAL
CLQGKSTSQLVNLQPDYINPRAVQLGSLLVRGLTTLVLVNSACGFPWKTSDFMPWNVFDGKLFHQKYLQS
EKGYAVEVLLEQNRSRLTKFHNLKAVVCKACMKENRRITGRAHWGSHHAGRWGRQGSSYHRTGSGYSRSS
QGQPWRDQGPGSRQYEHDQWRRY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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