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Report for CCDS75560.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75560.1 Public Homo sapiens 7 IQCE 24 110 108 CCDS HistoryNCBI Gene:23288Re-query CCDS DB by CCDS ID:75560.1Re-query CCDS DB by GeneID:23288See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75560.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000325979.11 ENSP00000313772.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000325979.11Link to Ensembl Protein Viewer:ENSP00000313772.7Re-query CCDS DB by Nucleotide ID:ENST00000325979Re-query CCDS DB by Protein ID:ENSP00000313772
Original member Current member EBI ENST00000623361.3 ENSP00000485601.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000623361.3Link to Ensembl Protein Viewer:ENSP00000485601.1Re-query CCDS DB by Nucleotide ID:ENST00000623361Re-query CCDS DB by Protein ID:ENSP00000485601
Original member Current member NCBI NM_001287501.2 NP_001274430.1 Accepted alive Link to Nucleotide Sequence:NM_001287501.2Link to Protein Sequence:NP_001274430.1Re-query CCDS DB by Nucleotide ID:NM_001287501Re-query CCDS DB by Protein ID:NP_001274430Link to BLAST:NP_001274430.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001274430.1 630 Q6IPM2-2 630 100% 0 0

Chromosomal Locations for CCDS 75560.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 2571591 2571654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2572192 2572326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2573418 2573488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2578242 2578355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2578476 2578526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2582580 2582650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2583637 2583709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2584236 2584285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2586208 2586371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2587822 2587877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2589907 2590106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2593022 2593126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2594886 2594976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2598465 2598632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2601441 2601464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2604881 2604991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2605876 2605997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2607124 2607227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2610044 2610162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1893 nt):
ATGCCTCTGGGCGGCCGAGCGTCCCTGACCCCGCAGAAGCTGTGGCTGGGAACCGCAAAGCCAGGAAGTC
TGACCCAGGCCCTGAACTCACCCCTCACCTGGGAGCATGCGTGGACTGGCGTCCCCGGCGGCACTCCTGA
CTGTCTGACAGACACCTTCAGAGTGAAGAGGCCACATCTCAGGCGCTCTGCCAGCAACGGTCATGTCCCT
GGGACTCCTGTCTACAGAGAAAAAGAAGATATGTATGACGAGATTATTGAGTTAAAGAAGTCATTGCACG
TGCAGAAGAGCGACGTGGACCTGATGAGAACGAAGCTCCGGCGCCTGGAGGAGGAAAACAGCAGGAAGGA
CCGGCAGATAGAGCAGCTCCTGGATCCCAGCCGCGGCACGGATTTTGTTCGGACTCTGGCAGAGAAAAGG
CCCGATGCCAGTTGGGTCATTAACGGGCTGAAGCAGAGGATCCTGAAGCTGGAACAGCAGTGCAAGGAGA
AGGACGGCACCATCAGCAAACTCCAGACCGATATGAAGACTACCAACCTGGAAGAGATGCGGATCGCCAT
GGAGACATACTACGAGGAGGTGCATCGTCTCCAGACCCTCTTGGCAAGTTCTGAAACCACCGGAAAGAAG
CCCCTGGGGGAGAAGAAGACGGGCGCCAAAAGGCAGAAGAAGATGGGCAGTGCCCTCCTGAGCTTGTCCC
GGAGTGTCCAGGAGCTCACGGAAGAGAACCAGAGCCTGAAGGAGGACCTGGACCGCGTGCTGAGCACCTC
CCCAACCATCTCCAAGACACAGGGTTATGTGGAGTGGAGCAAGCCCCGGCTGCTGAGGCGCATTGTGGAG
CTGGAGAAGAAACTAAGTGTGATGGAGAGCTCAAAATCACACGCCGCAGAGCCAGTCAGATCACACCCGC
CAGCCTGCCTTGCATCCAGCTCTGCGCTGCACAGACAGCCACGAGGGGACCGCAACAAGGACCACGAGCG
TCTCCGAGGGGCTGTGAGAGACCTGAAGGAAGAGCGGACCGCGCTGCAGGAGCAGCTGCTGCAGAGAGAT
TTGGAGGTGAAGCAGCTCCTGCAGGCGAAGGCCGACCTGGAGAAGGAGCTGGAGTGCGCGAGGGAGGGCG
AGGAGGAGAGGAGAGAGCGAGAGGAGGTTTTGAGAGAGGAGATTCAGACACTTACCAGCAAGCTCCAAGA
ATTGCAAGAAATGAAGAAAGAAGAGAAAGAGGATTGCCCGGAAGTTCCTCATAAGGCCCAAGAGCTCCCA
GCTCCCACTCCCAGCAGCAGGCACTGCGAGCAAGACTGGCCGCCGGATTCCAGCGAGGAGGGGCTCCCGC
GGCCCCGCTCCCCCTGCTCTGATGGGAGAAGAGACGCCGCGGCCAGAGTCCTGCAGGCCCAGTGGAAGGT
GTACAAGCACAAGAAAAAAAAGGCTGTTCTGGATGAGGCGGCTGTGGTGCTTCAGGCAGCTTTCAGGGGA
CATCTCACGCGGACAAAGCTCTTAGCAAGCAAAGCACATGGCTCAGAGCCACCCAGCGTGCCAGGCCTCC
CAGACCAGAGCTCTCCTGTGCCCCGCGTTCCGAGCCCCATCGCCCAGGCCACGGGCAGCCCTGTGCAGGA
GGAGGCCATCGTCATCATCCAGTCCGCTCTGCGGGCACACCTGGCCCGGGCCAGGCACAGTGCTACCGGT
AAAAGAACCACCACCGCAGCTTCTACCAGGAGGAGATCGGCTTCAGCCACACACGGGGACGCCTCCTCCC
CACCCTTCCTCGCAGCTCTTCCTGACCCCTCTCCCTCAGGGCCACAGGCCTTGGCACCTCTACCTGGGGA
TGACGTCAACTCCGATGATTCCGACGATATTGTCATTGCACCGTCTCTGCCCACGAAGAACTTTCCAGTT
TAG

Translation (630 aa):
MPLGGRASLTPQKLWLGTAKPGSLTQALNSPLTWEHAWTGVPGGTPDCLTDTFRVKRPHLRRSASNGHVP
GTPVYREKEDMYDEIIELKKSLHVQKSDVDLMRTKLRRLEEENSRKDRQIEQLLDPSRGTDFVRTLAEKR
PDASWVINGLKQRILKLEQQCKEKDGTISKLQTDMKTTNLEEMRIAMETYYEEVHRLQTLLASSETTGKK
PLGEKKTGAKRQKKMGSALLSLSRSVQELTEENQSLKEDLDRVLSTSPTISKTQGYVEWSKPRLLRRIVE
LEKKLSVMESSKSHAAEPVRSHPPACLASSSALHRQPRGDRNKDHERLRGAVRDLKEERTALQEQLLQRD
LEVKQLLQAKADLEKELECAREGEEERREREEVLREEIQTLTSKLQELQEMKKEEKEDCPEVPHKAQELP
APTPSSRHCEQDWPPDSSEEGLPRPRSPCSDGRRDAAARVLQAQWKVYKHKKKKAVLDEAAVVLQAAFRG
HLTRTKLLASKAHGSEPPSVPGLPDQSSPVPRVPSPIAQATGSPVQEEAIVIIQSALRAHLARARHSATG
KRTTTAASTRRRSASATHGDASSPPFLAALPDPSPSGPQALAPLPGDDVNSDDSDDIVIAPSLPTKNFPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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