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Report for CCDS75573.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75573.1 Public Homo sapiens 7 TRIL 24 110 108 CCDS HistoryNCBI Gene:9865Re-query CCDS DB by CCDS ID:75573.1Re-query CCDS DB by GeneID:9865See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75573.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000539664.3 ENSP00000479256.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000539664.3Link to Ensembl Protein Viewer:ENSP00000479256.1Re-query CCDS DB by Nucleotide ID:ENST00000539664Re-query CCDS DB by Protein ID:ENSP00000479256
Original member Current member NCBI NM_014817.4 NP_055632.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014817.4Link to Protein Sequence:NP_055632.2Re-query CCDS DB by Nucleotide ID:NM_014817Re-query CCDS DB by Protein ID:NP_055632Link to BLAST:NP_055632.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055632.2 811 Q7L0X0 811 100% 0 0

Chromosomal Locations for CCDS 75573.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 28955611 28958046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2436 nt):
ATGGAGGCTGCCCGCGCCTTGCGCCTCCTGCTCGTGGTGTGCGGCTGCCTCGCGCTCCCGCCGCTGGCCG
AGCCCGTGTGCCCGGAGCGCTGCGACTGCCAGCATCCCCAGCATCTCCTGTGCACCAACAGGGGGCTCCG
CGTAGTGCCCAAGACCAGCTCGCTGCCGAGCCCCCACGACGTGCTCACCTACAGCCTCGGCGGCAACTTC
ATAACCAACATCACGGCCTTCGACTTCCACCGTCTGGGGCAGCTCAGACGGCTGGACCTGCAGTACAACC
AGATCCGCTCTCTGCACCCCAAGACCTTCGAGAAGCTCTCGCGGCTGGAAGAGCTGTACCTGGGGAACAA
CCTCTTGCAGGCGCTCGCCCCGGGCACGCTGGCCCCGCTGCGCAAGCTGCGCATCCTCTACGCCAACGGG
AACGAGATCAGCCGCCTAAGCCGCGGCTCCTTCGAGGGCCTGGAGAGTCTAGTCAAGCTGCGGCTGGACG
GGAACGCCCTGGGGGCGCTGCCGGACGCGGTCTTCGCTCCCTTGGGCAACCTGCTCTACCTACATCTGGA
GTCCAACCGGATCCGCTTTCTGGGCAAGAACGCCTTCGCCCAGCTAGGCAAGCTGCGCTTCCTCAACCTC
TCTGCCAACGAGCTACAGCCCTCCCTGCGCCACGCGGCCACCTTCGCACCGCTGCGCTCCCTCTCCTCCC
TCATCCTCTCGGCCAACAACCTGCAGCACCTCGGGCCGCGCATCTTCCAGCACCTGCCACGTCTCGGCCT
GCTCTCGCTCAGGGGCAACCAGCTCACGCACCTCGCGCCTGAGGCCTTTTGGGGCTTGGAGGCCCTGCGC
GAGCTGCGCCTGGAGGGTAATCGGCTGAGCCAGCTGCCAACTGCGCTGCTGGAGCCTCTGCACAGCCTGG
AGGCGCTGGACCTGAGCGGCAATGAGCTGTCCGCCCTGCACCCGGCCACCTTCGGCCACCTGGGCCGGCT
GCGCGAGCTCAGCCTGCGCAACAACGCGCTCAGCGCCCTATCCGGGGACATCTTCGCCGCCAGCCCAGCC
CTTTATCGGCTGGATCTAGACGGCAACGGCTGGACCTGCGACTGCCGGCTGCGAGGCCTGAAGCGCTGGA
TGGGCGACTGGCACTCGCAGGGCCGGCTCCTCACTGTCTTCGTGCAGTGTCGCCACCCCCCGGCCCTGCG
AGGCAAATACCTGGATTACCTGGATGACCAGCAGCTGCAAAATGGATCCTGCGCGGATCCCTCGCCCTCA
GCTTCCCTGACCGCTGACCGCAGGCGGCAGCCCCTACCCACGGCCGCAGGGGAGGAGATGACGCCACCTG
CAGGTCTCGCGGAGGAGCTGCCGCCGCAGCCGCAGCTCCAGCAGCAGGGGCGATTTCTAGCTGGGGTGGC
CTGGGATGGGGCCGCCAGGGAGCTGGTAGGCAACCGCAGCGCCCTAAGGCTGAGTCGGCGGGGCCCGGGC
CTCCAGCAGCCCAGCCCCTCCGTCGCTGCCGCCGCGGGCCCGGCTCCACAGTCCCTAGACCTGCACAAGA
AGCCCCAGCGGGGCCGTCCGACTCGGGCAGATCCCGCCCTCGCGGAGCCCACCCCAACGGCCTCTCCTGG
CTCTGCGCCATCGCCCGCCGGCGACCCCTGGCAGCGCGCGACGAAGCATCGTCTGGGCACGGAGCACCAG
GAGCGTGCCGCCCAGTCCGACGGTGGGGCCGGGCTGCCGCCGCTGGTGTCCGACCCATGCGACTTCAACA
AGTTCATTCTGTGCAACCTGACGGTGGAGGCGGTGGGCGCAGACAGCGCCTCGGTGCGCTGGGCCGTGCG
CGAGCACCGCAGTCCCCGGCCGCTGGGCGGCGCGCGCTTCCGCCTGCTCTTTGACCGCTTTGGCCAGCAG
CCCAAGTTCCACCGCTTCGTCTACCTGCCTGAGAGCAGCGACTCGGCCACGCTGCGCGAGCTGCGCGGGG
ACACCCCCTACCTGGTGTGCGTGGAGGGCGTGCTTGGGGGCCGTGTCTGCCCTGTGGCTCCCCGGGACCA
CTGCGCGGGGCTGGTCACCCTACCGGAGGCCGGGAGCCGGGGCGGCGTCGACTACCAGCTGCTGACCTTG
GCCCTGCTGACGGTCAACGCGCTGCTGGTGCTCCTGGCCTTGGCGGCCTGGGCGTCTCGCTGGCTGCGTA
GGAAACTGCGGGCTAGGCGGAAGGGCGGGGCCCCGGTCCACGTTCGGCACATGTACTCCACCCGACGGCC
CCTGCGCTCCATGGGCACCGGCGTGTCCGCCGACTTCTCGGGATTCCAGTCGCACCGGCCACGCACCACC
GTGTGCGCGCTCAGTGAGGCGGACCTCATCGAATTCCCCTGCGACCGCTTCATGGACAGTGCGGGCGGCG
GCGCGGGCGGCAGCCTGAGACGGGAGGACCGTCTCCTGCAGCGATTTGCCGACTAG

Translation (811 aa):
MEAARALRLLLVVCGCLALPPLAEPVCPERCDCQHPQHLLCTNRGLRVVPKTSSLPSPHDVLTYSLGGNF
ITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANG
NEISRLSRGSFEGLESLVKLRLDGNALGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFAQLGKLRFLNL
SANELQPSLRHAATFAPLRSLSSLILSANNLQHLGPRIFQHLPRLGLLSLRGNQLTHLAPEAFWGLEALR
ELRLEGNRLSQLPTALLEPLHSLEALDLSGNELSALHPATFGHLGRLRELSLRNNALSALSGDIFAASPA
LYRLDLDGNGWTCDCRLRGLKRWMGDWHSQGRLLTVFVQCRHPPALRGKYLDYLDDQQLQNGSCADPSPS
ASLTADRRRQPLPTAAGEEMTPPAGLAEELPPQPQLQQQGRFLAGVAWDGAARELVGNRSALRLSRRGPG
LQQPSPSVAAAAGPAPQSLDLHKKPQRGRPTRADPALAEPTPTASPGSAPSPAGDPWQRATKHRLGTEHQ
ERAAQSDGGAGLPPLVSDPCDFNKFILCNLTVEAVGADSASVRWAVREHRSPRPLGGARFRLLFDRFGQQ
PKFHRFVYLPESSDSATLRELRGDTPYLVCVEGVLGGRVCPVAPRDHCAGLVTLPEAGSRGGVDYQLLTL
ALLTVNALLVLLALAAWASRWLRRKLRARRKGGAPVHVRHMYSTRRPLRSMGTGVSADFSGFQSHRPRTT
VCALSEADLIEFPCDRFMDSAGGGAGGSLRREDRLLQRFAD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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