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Report for CCDS75583.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75583.1 Public Homo sapiens 7 MATCAP2 24 110 108 CCDS HistoryNCBI Gene:23366Re-query CCDS DB by CCDS ID:75583.1Re-query CCDS DB by GeneID:23366See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75583.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000453212.5 ENSP00000390183.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000453212.5Link to Ensembl Protein Viewer:ENSP00000390183.1Re-query CCDS DB by Nucleotide ID:ENST00000453212Re-query CCDS DB by Protein ID:ENSP00000390183
Original member Current member NCBI NM_001300956.2 NP_001287885.1 Accepted alive Link to Nucleotide Sequence:NM_001300956.2Link to Protein Sequence:NP_001287885.1Re-query CCDS DB by Nucleotide ID:NM_001300956Re-query CCDS DB by Protein ID:NP_001287885Link to BLAST:NP_001287885.1

Chromosomal Locations for CCDS 75583.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 36326760 36326918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 36330982 36331079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 36333856 36334161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 36335046 36335178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 36336154 36336285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (828 nt):
ATGGAACTGACTTTACAGAAATATGGAAGTTATGAAAAATTTGAACAAGCCACTGGTGGTAGCTTGCTCT
CTAAAACTCGAATCTGGAGTCACGTTAGGAAGTACATGATGAAGGAAGGCTGCCTAGGGGAGATTGTAGT
TCATCTCACTGAGGACCTGCTTTCCCGAGCGTCAATGACAGTAGTAAATGGATGTCCGACTCTGACTATC
AATGTGTCCACTGCACGTGAGCATTGGCTGGAGGGAATGCTGAGGCATGAAATAGGTACACATTATTTTC
GAGGTATTAACAACCTCCAGCAGCCATGGAACAGTTGGACTGGACGTAAAAAACATGAGCTAAAGCCAAA
TAATCCCACAGAGGAAGGACTAGCAAGCATTCACAGTGTTCTGTTTAGAAAAGACCCTTTTTTATGGAGG
GCTGCCCTCCTCTACTACACTGTTTATCAAGCCAGCCAAATGTCTTTTTGTGAACTCTTTAAAGATATTG
GCAGGTTTGTCAAGGACCCCAATACAAGATGGGATTATTGTGTACGGGCCAAGAGGGGATGGACTGATAC
TTCCCAACCAGGGTGTTTTAGTAAAGACCAGGTATACTTGGATGGAATTCTTCAAATCCTCCGATACAGA
GATACCATAGACTTCCATCTGCTGACTGCTCTCGGGAAGGTTTCTTATGAAGATGTGGATCGCTTAAAAG
GATTGGCAGTTACCGAAAACATGAGGGTCCCTCATTTCCTGCAGGACCATGGCCGATATATGGAACACTT
AGAGAAGATCATGGAAGTGAATGAACTGACTGACAGGGAACTGAAAGATCTTATATAG

Translation (275 aa):
MELTLQKYGSYEKFEQATGGSLLSKTRIWSHVRKYMMKEGCLGEIVVHLTEDLLSRASMTVVNGCPTLTI
NVSTAREHWLEGMLRHEIGTHYFRGINNLQQPWNSWTGRKKHELKPNNPTEEGLASIHSVLFRKDPFLWR
AALLYYTVYQASQMSFCELFKDIGRFVKDPNTRWDYCVRAKRGWTDTSQPGCFSKDQVYLDGILQILRYR
DTIDFHLLTALGKVSYEDVDRLKGLAVTENMRVPHFLQDHGRYMEHLEKIMEVNELTDRELKDLI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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