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Report for CCDS75795.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75795.1 Public Homo sapiens 8 SLC45A4 24 110 108 CCDS HistoryNCBI Gene:57210Re-query CCDS DB by CCDS ID:75795.1Re-query CCDS DB by GeneID:57210See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75795.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000517878.6 ENSP00000428137.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000517878.6Link to Ensembl Protein Viewer:ENSP00000428137.1Re-query CCDS DB by Nucleotide ID:ENST00000517878Re-query CCDS DB by Protein ID:ENSP00000428137
Original member Current member NCBI NM_001286646.2 NP_001273575.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001286646.2Link to Protein Sequence:NP_001273575.1Re-query CCDS DB by Nucleotide ID:NM_001286646Re-query CCDS DB by Protein ID:NP_001273575Link to BLAST:NP_001273575.1

Chromosomal Locations for CCDS 75795.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 141211572 141211697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 141212197 141212556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 141215759 141215970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 141217090 141217189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 141218011 141219029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 141219650 141219829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 141221577 141221765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 141253989 141254229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2427 nt):
ATGAAAATGGCTCCGCAGAATGCCGACCCGGAATCTATGCAAGTTCAAGAGTTATCCGTGCCCCTGCCGG
ACCCGCAGAAAGCCGGAGGCGCAGAGGCCGAGAACTGCGAGACCATCAGCGAGGGGTCCATAGACCGAAT
CCCCATGCGCCTGTGGGTGATGCACGGGGCGGTGATGTTTGGCAGGGAGTTCTGTTACGCCATGGAAACC
GCTCTGGTCACACCAATACTGTTGCAGATTGGCCTTCCGGAGCAGTACTACAGCCTCACCTGGTTCCTGA
GCCCCATCCTTGGCCTCATCTTCACACCTCTCATTGGGTCTGCGAGTGACCGGTGCACCCTGAGCTGGGG
CCGCCGGCGGCCCTTCATCCTCGCCCTCTGCGTTGGCGTCCTCTTTGGCGTTGCACTTTTCCTTAACGGC
TCTGCCATCGGTCTGGCCCTCGGCGATGTCCCCAACCGGCAGCCCATTGGCATCGTGCTCACGGTGCTGG
GAGTGGTGGTCCTGGACTTCAGCGCCGATGCCACCGAGGGGCCCATCCGTGCCTATCTGCTGGACGTGGT
GGACAGCGAGGAGCAGGACATGGCCCTCAACATCCACGCCTTCTCTGCCGGCCTCGGCGGAGCCATCGGC
TACGTGCTGGGTGGGCTGGACTGGACCCAGACCTTCCTGGGCAGCTGGTTCCGGACCCAGAACCAGGTGC
TCTTCTTCTTTGCCGCCATCATCTTCACGGTGTCCGTGGCCCTGCACCTGTTCAGCATCGACGAGGAGCA
GTACAGCCCGCAGCAGGAGCGCAGCGCTGAGGAGCCCGGCGCCCTGGATGGGGGCGAGCCGCACGGCGTC
CCTGCCTTCCCAGACGAGGTACAGTCGGAGCACGAGCTGGCCCTGGACTACCCGGACGTGGACATCATGC
GCAGCAAAAGCGACTCGGCATTGCACGTGCCGGACACCGCGCTGGACCTGGAGCCCGAGCTGCTGTTCCT
GCACGACATCGAGCCCTCCATCTTCCACGACGCCTCCTACCCCGCCACCCCCCGCAGCACCAGCCAGGAG
CTCGCCAAGACCAAGCTGCCCCGCCTGGCCACCTTCCTCAAGGAAGCCGCCAAGGAGGACGAGACCTTGC
TGGATAATCACTTGAATGAAGCTAAAGTCCCAAACGGAAGTGGCTCCCCCACAAAAGACGCCCTCGGCGG
CTACACCAGGGTGGACACGAAGCCCTCGGCCACGTCGAGCTCCATGCGGCGGCGGCGGCACGCGTTCCGC
AGGCAGGCCTCCAGCACCTTCTCCTACTACGGCAAGCTTGGGTCCCACTGCTACCGCTACCGGCGCGCCA
ACGCCGTGGTGCTGATCAAGCCGTCGCGCAGCATGAGCGACCTGTACGACATGCAGAAGCGGCAGCGGCA
GCACCGGCACCGGAACCAGAGCGGGGCCACCACCTCCAGCGGGGACACCGAGAGTGAGGAGGGGGAGGGC
GAGACCACGGTGCGCCTGCTGTGGCTCTCCATGCTGAAGATGCCCAGGGAGCTGATGCGGCTGTGCCTCT
GCCACCTCCTCACCTGGTTCTCTGTCATCGCCGAGGCCGTGTTCTACACCGACTTCATGGGCCAGGTCAT
CTTCGAAGGCGACCCCAAGGCCCCCTCGAACTCGACCGCCTGGCAAGCCTACAACGCCGGGGTCAAGATG
GGCTGCTGGGGCCTGGTCATTTATGCCGCCACTGGTGCTATTTGTTCAGCCCTGTTACAGAAGTACTTGG
ACAACTACGACCTGAGCGTCAGGGTGATCTACGTGCTGGGGACGCTGGGCTTCTCTGTCGGCACAGCCGT
GATGGCCATGTTTCCCAACGTCTACGTCGCCATGGTCACCATCAGCACCATGGGCATCGTCTCCATGAGC
ATCTCCTACTGCCCGTACGCCCTGCTGGGCCAGTACCATGACATCAAGCAGTACATCCACCACAGCCCCG
GGAACTCCAAGCGAGGGTTTGGCATAGATTGTGCCATCCTGTCCTGCCAAGTGTACATCTCGCAGATCCT
GGTGGCCTCTGCCCTTGGGGGCGTGGTCGACGCCGTGGGGACTGTCCGCGTCATCCCCATGGTGGCCTCT
GTGGGCTCTTTCCTGGGCTTCCTGACGGCCACATTCCTGGTGATCTATCCCAACGTGTCAGAGGAGGCCA
AGGAGGAGCAGAAAGGCCTGTCTTCCCCGTTGGCCGGCGAAGGCAGGGCCGGTGGGAACAGCGAAAAGCC
CACCGTGCTGAAGCTCACGCGGAAGGAGGGCCTGCAGGGACCGGTGGAGACAGAGTCCGTGACGCCTGCA
GGTATTGACGTCTGTCAGATCTCGTCACATTGGCTGGTGCCGCAGCTGTTGGAGAGTATTTTTCTTTATG
ATTATTTTAGAAAAAAAATTTTCTTTTCCACAATGTGGTTCTCTTAG

Translation (808 aa):
MKMAPQNADPESMQVQELSVPLPDPQKAGGAEAENCETISEGSIDRIPMRLWVMHGAVMFGREFCYAMET
ALVTPILLQIGLPEQYYSLTWFLSPILGLIFTPLIGSASDRCTLSWGRRRPFILALCVGVLFGVALFLNG
SAIGLALGDVPNRQPIGIVLTVLGVVVLDFSADATEGPIRAYLLDVVDSEEQDMALNIHAFSAGLGGAIG
YVLGGLDWTQTFLGSWFRTQNQVLFFFAAIIFTVSVALHLFSIDEEQYSPQQERSAEEPGALDGGEPHGV
PAFPDEVQSEHELALDYPDVDIMRSKSDSALHVPDTALDLEPELLFLHDIEPSIFHDASYPATPRSTSQE
LAKTKLPRLATFLKEAAKEDETLLDNHLNEAKVPNGSGSPTKDALGGYTRVDTKPSATSSSMRRRRHAFR
RQASSTFSYYGKLGSHCYRYRRANAVVLIKPSRSMSDLYDMQKRQRQHRHRNQSGATTSSGDTESEEGEG
ETTVRLLWLSMLKMPRELMRLCLCHLLTWFSVIAEAVFYTDFMGQVIFEGDPKAPSNSTAWQAYNAGVKM
GCWGLVIYAATGAICSALLQKYLDNYDLSVRVIYVLGTLGFSVGTAVMAMFPNVYVAMVTISTMGIVSMS
ISYCPYALLGQYHDIKQYIHHSPGNSKRGFGIDCAILSCQVYISQILVASALGGVVDAVGTVRVIPMVAS
VGSFLGFLTATFLVIYPNVSEEAKEEQKGLSSPLAGEGRAGGNSEKPTVLKLTRKEGLQGPVETESVTPA
GIDVCQISSHWLVPQLLESIFLYDYFRKKIFFSTMWFS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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