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Report for CCDS75797.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75797.1 Public Homo sapiens 8 JRK 24 110 108 CCDS HistoryNCBI Gene:8629Re-query CCDS DB by CCDS ID:75797.1Re-query CCDS DB by GeneID:8629See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75797.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000571961.7 ENSP00000461610.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000571961.7Link to Ensembl Protein Viewer:ENSP00000461610.1Re-query CCDS DB by Nucleotide ID:ENST00000571961Re-query CCDS DB by Protein ID:ENSP00000461610
Original member Current member EBI ENST00000615982.4 ENSP00000483808.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000615982.4Link to Ensembl Protein Viewer:ENSP00000483808.1Re-query CCDS DB by Nucleotide ID:ENST00000615982Re-query CCDS DB by Protein ID:ENSP00000483808
Original member Current member NCBI NM_001077527.3 NP_001070995.2 Accepted alive Link to Nucleotide Sequence:NM_001077527.3Link to Protein Sequence:NP_001070995.2Re-query CCDS DB by Nucleotide ID:NM_001077527Re-query CCDS DB by Protein ID:NP_001070995Link to BLAST:NP_001070995.2
Original member Current member NCBI NM_001279352.2 NP_001266281.1 Accepted alive Link to Nucleotide Sequence:NM_001279352.2Link to Protein Sequence:NP_001266281.1Re-query CCDS DB by Nucleotide ID:NM_001279352Re-query CCDS DB by Protein ID:NP_001266281Link to BLAST:NP_001266281.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001070995.2 556 O75564-1 556 100% 0 0
NP_001266281.1 556 O75564-1 556 100% 0 0

Chromosomal Locations for CCDS 75797.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 142658855 142658944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 142664478 142666058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1671 nt):
ATGGCCTCCAAGCCGGCTGCCGGGAAGAGCAGAGGGGAGAAGCGGAAGAGGGTGGTGCTGACACTGAAGG
AGAAGATTGACATCTGCACGCGCCTGGAGAAGGGCGAGAGCCGGAAGGCACTGATGCAGGAGTACAATGT
GGGCATGTCCACCCTCTACGACATCAGGGCCCACAAGGCGCAGCTGCTCCGGTTCTTCGCCAGCTCCGAC
TCCAACAAGGCGCTGGAGCAGCGGCGCACGCTGCACACGCCCAAGCTGGAGCACCTGGACCGCGTCCTGT
ACGAGTGGTTCCTGGGGAAGCGCTCCGAGGGCGTCCCCGTGTCAGGCCCCATGCTCATCGAGAAGGCCAA
GGACTTCTACGAGCAGATGCAGCTCACTGAGCCCTGCGTGTTCTCCGGAGGGTGGCTTTGGCGCTTTAAG
GCCAGACACGGCATTAAAAAGCTAGATGCATCCAGTGAAAAGCAGTCAGCCGACCACCAGGCCGCGGAGC
AGTTCTGTGCGTTTTTCAGGAGCTTGGCTGCTGAGCACGGGCTGTCCGCCGAGCAGGTTTACAACGCTGA
TGAGACCGGCCTTTTCTGGCGGTGCCTGCCAAATCCCACTCCGGAAGGCGGGGCTGTGCCTGGCCCCAAG
CAGGGCAAGGACCGGCTGACCGTGCTGATGTGTGCCAACGCCACGGGCTCCCACAGGCTCAAGCCCTTGG
CCATCGGGAAGTGCAGCGGTCCCAGGGCTTTCAAAGGCATCCAGCACCTGCCCGTCGCCTATAAGGCCCA
GGGGAACGCCTGGGTGGACAAGGAGATTTTTTCCGATTGGTTCCATCATATCTTTGTGCCCTCGGTGAGA
GAGCACTTCAGAACCATAGGTTTGCCGGAAGACAGCAAAGCCGTTCTCTTGCTGGACAGCTCCCGGGCTC
ACCCGCAGGAGGCCGAGCTGGTGTCCAGTAACGTTTTCACCATCTTCCTGCCTGCCAGCGTGGCCTCATT
GGTGCAGCCCATGGAGCAGGGCATTCGGAGAGATTTCATGAGGAACTTCATTAACCCTCCGGTCCCCCTG
CAGGGCCCCCACGCCCGCTACAACATGAACGATGCCATATTCAGCGTGGCCTGTGCCTGGAACGCAGTCC
CTAGCCACGTCTTCAGGCGGGCCTGGAGGAAGCTGTGGCCGTCGGTTGCGTTTGCCGAAGGCTCCTCCTC
TGAGGAGGAGTTGGAGGCAGAGTGCTTCCCAGTGAAGCCCCACAACAAGTCCTTTGCACACATCCTGGAG
CTTGTGAAGGAAGGCTCCTCCTGCCCGGGCCAGCTTCGCCAGCGCCAGGCCGCCAGCTGGGGGGTAGCGG
GAAGGGAGGCAGAAGGGGGACGGCCCCCTGCTGCCACGTCGCCAGCAGAGGTTGTGTGGAGTTCAGAAAA
GACTCCGAAAGCTGACCAGGACGGCAGAGGAGATCCTGGTGAGGGCGAGGAGGTGGCCTGGGAGCAGGCG
GCCGTGGCCTTTGACGCAGTCCTGCGCTTTGCGGAGCGGCAGCCATGCTTCAGTGCGCAGGAAGTGGGGC
AGCTGCGGGCGCTGCGTGCCGTGTTCCGGAGCCAGCAGCAGGAGACTGTGGGCCTTGAGGATGTGGTAGT
GACCTCACCAGAGGAGTTGGCAATTCCTAAGTGCTGCCTGGAGGCCTCTACAGAGACATAA

Translation (556 aa):
MASKPAAGKSRGEKRKRVVLTLKEKIDICTRLEKGESRKALMQEYNVGMSTLYDIRAHKAQLLRFFASSD
SNKALEQRRTLHTPKLEHLDRVLYEWFLGKRSEGVPVSGPMLIEKAKDFYEQMQLTEPCVFSGGWLWRFK
ARHGIKKLDASSEKQSADHQAAEQFCAFFRSLAAEHGLSAEQVYNADETGLFWRCLPNPTPEGGAVPGPK
QGKDRLTVLMCANATGSHRLKPLAIGKCSGPRAFKGIQHLPVAYKAQGNAWVDKEIFSDWFHHIFVPSVR
EHFRTIGLPEDSKAVLLLDSSRAHPQEAELVSSNVFTIFLPASVASLVQPMEQGIRRDFMRNFINPPVPL
QGPHARYNMNDAIFSVACAWNAVPSHVFRRAWRKLWPSVAFAEGSSSEEELEAECFPVKPHNKSFAHILE
LVKEGSSCPGQLRQRQAASWGVAGREAEGGRPPAATSPAEVVWSSEKTPKADQDGRGDPGEGEEVAWEQA
AVAFDAVLRFAERQPCFSAQEVGQLRALRAVFRSQQQETVGLEDVVVTSPEELAIPKCCLEASTET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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