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Report for CCDS75835.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75835.1 Public Homo sapiens 9 DCAF10 24 110 108 CCDS HistoryNCBI Gene:79269Re-query CCDS DB by CCDS ID:75835.1Re-query CCDS DB by GeneID:79269See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 75835.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000242323.8 ENSP00000242323.8 Accepted alive Link to Ensembl Transcript Viewer:ENST00000242323.8Link to Ensembl Protein Viewer:ENSP00000242323.8Re-query CCDS DB by Nucleotide ID:ENST00000242323Re-query CCDS DB by Protein ID:ENSP00000242323
Original member Current member NCBI NM_001286810.2 NP_001273739.1 Accepted alive Link to Nucleotide Sequence:NM_001286810.2Link to Protein Sequence:NP_001273739.1Re-query CCDS DB by Nucleotide ID:NM_001286810Re-query CCDS DB by Protein ID:NP_001273739Link to BLAST:NP_001273739.1

Chromosomal Locations for CCDS 75835.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 37800628 37800647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37819288 37819401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37842089 37842286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37854780 37854982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37857241 37857351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37860048 37860193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37861140 37861508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1161 nt):
ATGCTCAGTCGCTCACACAGGTCAGTGCTGACAGTTGCTTGTGAACAAACTGAAGTTCTGCTTTTTGACC
CTATATCTTCAAAGCACATAAAAACACTTTCTGAAGCTCATGAAGACTGTGTAAATAATATCAGATTTCT
TGATAACCGGCTGTTTGCTACCTGCTCTGATGACACTACAATAGCACTATGGGATCTGAGAAAATTGAAC
ACCAAAGTATGCACTTTACATGGTCACACTAGCTGGGTGAAGAACATCGAATATGATACTAATACAAGAC
TCTTAGTAACATCAGGATTTGATGGAAATGTCATTATTTGGGACACTAACAGGTATACAGAAGATGGGTG
TCCACATAAGAAATTCTTTCACACACGTTTTCTCATGCGAATGAGGTTAACACCAGATTGTTCCAAAATG
TTGATTTCAACGTCCTCTGGATATCTCTTAATTTTGCATGACCTTGACTTAACTAAGTCTTTAGAAGTAG
GCAGCTATCCCATTTTAAGAGCAAGAAGAACTACTTCAAGTTCAGATTTGACCACTTCATCAAGTTCATC
TGGTCCTAGAGTTTCTGGCTCACCTTGTCATCATAGTGATTCTAATTCTTCTGAGAAACACATGTCACGA
GCCTCTCAAAGAGAAGGAGTTTCACCACGAAATAGTCTTGAAGTCGTAACCCCTGAAGTTCTTGGTGAGA
GTGACCACGGAAACTGCATCACGTCCTTACAGCTGCACCCAAAAGGCTGGGCCACTCTTCTTCGGTGCTC
AAGCAACAGTGATGATGAGGAGTGTACTTGTGTCTATGAATTCCAAGAAGGAGCTCCAGTGCGACCTGTC
TCACCTCGCTGTTCTCTACGACTGACTCATTACATTGAAGAAGCCAATGTAGGCAGGGGTTACATCAAAG
AACTTTGCTTCAGCCCCGATGGACGAATGATTTCTTCCCCACATGGCTATGGGATTCGCTTGTTGGGATT
TGACAAACAGTGCAGTGAACTTGTTGACTGCTTGCCCAAAGAAGCCAGTCCCCTGCGGGTGATCCGTTCT
CTGTACTCTCATAATGATGTGGTACTGACAACAAAGTTCTCTCCAACACATTGTCAGATTGCCTCAGGGT
GCCTTAGTGGACGGGTTTCTTTGTATCAGCCAAAGTTTTAG

Translation (386 aa):
MLSRSHRSVLTVACEQTEVLLFDPISSKHIKTLSEAHEDCVNNIRFLDNRLFATCSDDTTIALWDLRKLN
TKVCTLHGHTSWVKNIEYDTNTRLLVTSGFDGNVIIWDTNRYTEDGCPHKKFFHTRFLMRMRLTPDCSKM
LISTSSGYLLILHDLDLTKSLEVGSYPILRARRTTSSSDLTTSSSSSGPRVSGSPCHHSDSNSSEKHMSR
ASQREGVSPRNSLEVVTPEVLGESDHGNCITSLQLHPKGWATLLRCSSNSDDEECTCVYEFQEGAPVRPV
SPRCSLRLTHYIEEANVGRGYIKELCFSPDGRMISSPHGYGIRLLGFDKQCSELVDCLPKEASPLRVIRS
LYSHNDVVLTTKFSPTHCQIASGCLSGRVSLYQPKF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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