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Report for CCDS75942.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75942.1 Public Homo sapiens 9 EXD3 24 110 108 CCDS HistoryNCBI Gene:54932Re-query CCDS DB by CCDS ID:75942.1Re-query CCDS DB by GeneID:54932See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75942.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000479452.5 ENSP00000431859.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000479452.5Link to Ensembl Protein Viewer:ENSP00000431859.1Re-query CCDS DB by Nucleotide ID:ENST00000479452Re-query CCDS DB by Protein ID:ENSP00000431859
Original member Current member NCBI NM_001286823.2 NP_001273752.1 Accepted alive Link to Nucleotide Sequence:NM_001286823.2Link to Protein Sequence:NP_001273752.1Re-query CCDS DB by Nucleotide ID:NM_001286823Re-query CCDS DB by Protein ID:NP_001273752Link to BLAST:NP_001273752.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273752.1 246 Q8N9H8-4 246 100% 0 0

Chromosomal Locations for CCDS 75942.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 137366277 137366361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137366493 137366632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137367936 137367989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137372905 137373072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137373426 137373599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137383313 137383377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137395303 137395357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (741 nt):
ATGGACCCAGGAGATCCCGCTGGTGACCCTGCCGCTGGCGAGCGCCACCGCATGGGCCGGGACCCCCTCC
TGCTCCTGCAGGCCCTGCAGACCCTGTGGTCCACGCGGGAGCGGAAGCAGCTCCGGGAGGAAGCCTGGCG
GGGGTTTGCTGCCTTGGACGACCCCCTGGCCGGGCTTCTGGACATGCTGGAGAGCTGCCGGGGCCAGCGG
GGAGAGGGCCCCTCCCTGGCGGCCTGGATCTCCCACCAGCTGCAGTGCTGGCTACAGGCACAGCCATGCC
CGAGCCTGGCCCAGCACAGCCTGAGGCTGAAGCAGCTGCAGGCCCGAGCGGTCAAAGTCCTCACTGAGAG
CCCCCCCAGCCTTGCGGCACCACTGGCCAGCATCTTCCAGCTGCAGGATGCAGACAGGAGCTGCCTGCTG
GCACACGTCCACCGCCTCCACCACGAGGGCAGGTTCAGAGAAGCAGCCACGCTGGGCGCGACGTTGAAGC
TGCAGTCGGAGCTTGGCGTTGAAAAGATGAGCATCCCACTGCTCCTCCAGGACAAGGTGGCCCTCGTGGA
GCGCTATGTGGCCGGCTTCCCGGACCTCCAGAGGAGGCTGCTGGTCCTCATGGATTCCTGGTGCCAGCCC
GGCTTTGACATCAAGGACGTTGCCAGCTGCCATGTGACTGCAGCTGGAGCAGCTGCCTCTGGAGAGGAGC
GGCTGGGGCTGGCAGGAGCACAGCCCTCTTCTCCCGAGTGA

Translation (246 aa):
MDPGDPAGDPAAGERHRMGRDPLLLLQALQTLWSTRERKQLREEAWRGFAALDDPLAGLLDMLESCRGQR
GEGPSLAAWISHQLQCWLQAQPCPSLAQHSLRLKQLQARAVKVLTESPPSLAAPLASIFQLQDADRSCLL
AHVHRLHHEGRFREAATLGATLKLQSELGVEKMSIPLLLQDKVALVERYVAGFPDLQRRLLVLMDSWCQP
GFDIKDVASCHVTAAGAAASGEERLGLAGAQPSSPE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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