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Report for CCDS76028.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76028.1 Public Homo sapiens X PABIR3 24 110 108 CCDS HistoryNCBI Gene:159091Re-query CCDS DB by CCDS ID:76028.1Re-query CCDS DB by GeneID:159091See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76028.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000623326.4 ENSP00000485120.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000623326.4Link to Ensembl Protein Viewer:ENSP00000485120.1Re-query CCDS DB by Nucleotide ID:ENST00000623326Re-query CCDS DB by Protein ID:ENSP00000485120
Original member Current member NCBI NM_001170783.2 NP_001164254.1 Accepted alive Link to Nucleotide Sequence:NM_001170783.2Link to Protein Sequence:NP_001164254.1Re-query CCDS DB by Nucleotide ID:NM_001170783Re-query CCDS DB by Protein ID:NP_001164254Link to BLAST:NP_001164254.1
Original member Current member NCBI NM_001170784.2 NP_001164255.1 Accepted alive Link to Nucleotide Sequence:NM_001170784.2Link to Protein Sequence:NP_001164255.1Re-query CCDS DB by Nucleotide ID:NM_001170784Re-query CCDS DB by Protein ID:NP_001164255Link to BLAST:NP_001164255.1

Chromosomal Locations for CCDS 76028.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 134807599 134807708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134814771 134814849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134821327 134821377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (240 nt):
ATGGCACAGGAGAAAATGAAACTAGGTTTCAAGTCGCTGCCGAGTTCCACTACCGCAGACGGCAACATTC
TGAGAAGAGTCAACAGTGCCCCTTTGATCAATGGACTTGGTTTTAATTCACAGGTGTTGCAAGCTGACAT
GTTAAGAATTAGGACAAACAGAACAACATTTAGGAATCGACGCTCTCTGGAAATTACTTCACCCACTTCT
GTTGAACAGAAGCCCAAAGACCTCTTCTGA

Translation (79 aa):
MAQEKMKLGFKSLPSSTTADGNILRRVNSAPLINGLGFNSQVLQADMLRIRTNRTTFRNRRSLEITSPTS
VEQKPKDLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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