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Report for CCDS7617.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7617.1 Public Homo sapiens 10 MCMBP 24 110 108 CCDS HistoryNCBI Gene:79892Re-query CCDS DB by CCDS ID:7617.1Re-query CCDS DB by GeneID:79892See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7617.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360003.7 ENSP00000353098.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000360003.7Link to Ensembl Protein Viewer:ENSP00000353098.3Re-query CCDS DB by Nucleotide ID:ENST00000360003Re-query CCDS DB by Protein ID:ENSP00000353098
Original member Current member NCBI NM_024834.4 NP_079110.1 Accepted alive Link to Nucleotide Sequence:NM_024834.4Link to Protein Sequence:NP_079110.1Re-query CCDS DB by Nucleotide ID:NM_024834Re-query CCDS DB by Protein ID:NP_079110Link to BLAST:NP_079110.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079110.1 642 Q9BTE3-1 642 100% 0 0

Chromosomal Locations for CCDS 7617.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 119831474 119831600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119832012 119832100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119835540 119835704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119836896 119837029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119838535 119838700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119840843 119840960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119842472 119842595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119843248 119843426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119847613 119847713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119849425 119849576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119853050 119853194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119857338 119857439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119858884 119858925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119859041 119859181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119859799 119859884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119872527 119872584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1929 nt):
ATGCCGTGTGGGGAGGATTGGCTCAGCCACCCGCTGGGAATCGTGCAGGGATTCTTCGCCCAAAATGGAG
TTAATCCTGACTGGGAGAAGAAAGTAATTGAGTATTTTAAGGAAAAGCTGAAGGAAAATAATGCTCCTAA
GTGGGTACCATCACTGAACGAAGTTCCCCTTCATTATTTGAAACCTAATAGTTTTGTGAAATTTCGTTGC
ATGATTCAGGATATGTTTGACCCTGAGTTTTACATGGGAGTTTATGAAACGGTTAACCAAAACACAAAAG
CACATGTTCTTCATTTTGGAAAATATAGAGATGTAGCAGAGTGTGGGCCTCAACAAGAACTTGATTTAAA
CTCTCCACGAAATACCACTTTGGAAAGACAGACTTTCTATTGTGTTCCGGTGCCTGGGGAATCTACGTGG
GTAAAAGAAGCCTATGTTAATGCAAACCAAGCTCGAGTCAGTCCCTCAACATCCTACACTCCTAGTCGCC
ACAAGAGGAGTTATGAAGATGATGACGATATGGACCTACAGCCCAATAAGCAGAAAGACCAACATGCAGG
TGCCAGACAAGCAGGGAGTGTTGGTGGTCTTCAATGGTGTGGAGAGCCAAAACGTTTAGAAACTGAAGCT
TCTACTGGGCAACAGCTGAACTCTCTGAACTTGTCTTCTCCTTTTGATTTGAATTTTCCATTGCCAGGAG
AGAAGGGCCCTGCATGCCTTGTGAAGGTTTATGAAGATTGGGATTGTTTCAAAGTAAATGACATTCTTGA
GCTATATGGCATACTGTCTGTGGATCCTGTGCTGAGTATACTGAATAATGATGAAAGGGATGCCTCTGCA
CTGCTGGATCCGATGGAGTGCACAGACACAGCAGAGGAGCAGAGAGTACACAGTCCTCCTGCTTCATTAG
TGCCGAGAATTCATGTGATCTTAGCCCAGAAGTTGCAACACATCAACCCATTATTGCCTGCCTGCCTTAA
CAAAGAGGAGAGCAAAACCTGTAAGTTTGTTTCAAGTTTCATGTCCGAATTGTCTCCAGTCAGAGCAGAA
CTTCTTGGGTTCCTTACTCATGCCCTTCTGGGGGATAGTTTGGCTGCTGAATACCTTATATTACATCTCA
TCTCCACAGTATATACAAGAAGAGATGTCCTTCCACTAGGAAAATTTACAGTTAACTTGAGTGGTTGCCC
ACGGAATAGTACCTTCACAGAACACTTGTATCGAATTATTCAACATCTTGTTCCAGCATCTTTTCGTCTG
CAGATGACTATAGAGAACATGAACCATTTGAAATTCATTCCCCACAAAGACTACACAGCCAATCGCTTGG
TCAGTGGGCTCCTCCAGCTGCCCAGCAATACTTCCCTTGTAATCGATGAGACTCTCCTGGAACAGGGGCA
GCTGGATACCCCAGGTGTTCATAATGTGACAGCCCTGAGCAACCTCATAACGTGGCAGAAGGTGGATTAT
GACTTCAGCTACCATCAGATGGAATTCCCCTGCAATATTAACGTTTTCATTACTTCGGAGGGGAGGTCAC
TCCTCCCGGCAGACTGCCAGATTCACTTACAGCCCCAGCTAATTCCACCAAACATGGAGGAGTACATGAA
CAGCCTTCTCTCAGCGGTGCTGCCTTCCGTGCTGAACAAATTCCGCATTTATCTAACTCTTTTGAGATTC
TTGGAATATAGCATATCTGATGAAATAACCAAGGCAGTTGAAGATGACTTTGTGGAAATGCGGAAGAACG
ACCCTCAGAGCATCACTGCTGATGATCTTCACCAGCTGCTCGTGGTGGCTCGGTGTCTGTCTCTCAGTGC
TGGTCAGACAACGCTGTCAAGAGAACGATGGCTGAGAGCAAAGCAGCTAGAGTCTTTAAGAAGAACGAGG
CTTCAGCAGCAAAAATGTGTGAATGGAAATGAACTTTAA

Translation (642 aa):
MPCGEDWLSHPLGIVQGFFAQNGVNPDWEKKVIEYFKEKLKENNAPKWVPSLNEVPLHYLKPNSFVKFRC
MIQDMFDPEFYMGVYETVNQNTKAHVLHFGKYRDVAECGPQQELDLNSPRNTTLERQTFYCVPVPGESTW
VKEAYVNANQARVSPSTSYTPSRHKRSYEDDDDMDLQPNKQKDQHAGARQAGSVGGLQWCGEPKRLETEA
STGQQLNSLNLSSPFDLNFPLPGEKGPACLVKVYEDWDCFKVNDILELYGILSVDPVLSILNNDERDASA
LLDPMECTDTAEEQRVHSPPASLVPRIHVILAQKLQHINPLLPACLNKEESKTCKFVSSFMSELSPVRAE
LLGFLTHALLGDSLAAEYLILHLISTVYTRRDVLPLGKFTVNLSGCPRNSTFTEHLYRIIQHLVPASFRL
QMTIENMNHLKFIPHKDYTANRLVSGLLQLPSNTSLVIDETLLEQGQLDTPGVHNVTALSNLITWQKVDY
DFSYHQMEFPCNINVFITSEGRSLLPADCQIHLQPQLIPPNMEEYMNSLLSAVLPSVLNKFRIYLTLLRF
LEYSISDEITKAVEDDFVEMRKNDPQSITADDLHQLLVVARCLSLSAGQTTLSRERWLRAKQLESLRRTR
LQQQKCVNGNEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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