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Report for CCDS76319.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76319.1 Public Homo sapiens 10 LRMDA 24 110 108 CCDS HistoryNCBI Gene:83938Re-query CCDS DB by CCDS ID:76319.1Re-query CCDS DB by GeneID:83938See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76319.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000611255.5 ENSP00000480240.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000611255.5Link to Ensembl Protein Viewer:ENSP00000480240.1Re-query CCDS DB by Nucleotide ID:ENST00000611255Re-query CCDS DB by Protein ID:ENSP00000480240
Original member Current member NCBI NM_001305581.2 NP_001292510.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001305581.2Link to Protein Sequence:NP_001292510.1Re-query CCDS DB by Nucleotide ID:NM_001305581Re-query CCDS DB by Protein ID:NP_001292510Link to BLAST:NP_001292510.1

Chromosomal Locations for CCDS 76319.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 75431725 75431754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 75438394 75438494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 76036008 76036134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 76047164 76047303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 76058666 76058783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 76324401 76324485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 76557209 76557288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (681 nt):
ATGGCCGGGCTCGTGGTGCGTGGAACTCAAGTGTCCTACATAGGCCAGGACTGCAGAGAAATTCCAGAGC
ACCTTGGCAGGGACTGTGGACATTTCGCAAAGAGGCTTGATCTGAGCTTTAACCTTCTGAGGTCACTGGA
AGGACTGAGCGCATTCAGGAGCCTGGAGGAACTCATCTTGGACAACAATCAGCTGGGGGACGACCTTGTG
TTGCCAGGGTTACCCAGACTGCATACCTTAACCCTCAACAAGAACCGAATCACTGATTTGGAGAACCTGC
TGGATCACTTGGCAGAAGTGACACCAGCTCTGGAGTACCTCAGTCTGCTGGGCAACGTGGCCTGTCCCAA
CGAGCTGGTCAGCTTGGAAAAGGATGAGGAAGACTACAAGAGATACAGATGCTTTGTTCTGTACAAGCTG
CCCAACTTGAAATTTCTGGATGCCCAGAAAGTAACCAGACAAGAACGAGAGGAGGCGTTGGTCAGAGGAG
TCTTCATGAAGGTGGTGAAGCCCAAGGCTTCTAGTGAGGACGTTGCCAGCTCCCCGGAGCGCCACTACAC
GCCCTTGCCTTCTGCTTCCAGGGAACTCACCAGTCACCAAGGTGTCCTGGGGAAGTGTCGCTACGTTTAC
TATGGGAAAAACTCAGAGGGCAACAGGTTTATCCGAGATGACCAGCTCTGA

Translation (226 aa):
MAGLVVRGTQVSYIGQDCREIPEHLGRDCGHFAKRLDLSFNLLRSLEGLSAFRSLEELILDNNQLGDDLV
LPGLPRLHTLTLNKNRITDLENLLDHLAEVTPALEYLSLLGNVACPNELVSLEKDEEDYKRYRCFVLYKL
PNLKFLDAQKVTRQEREEALVRGVFMKVVKPKASSEDVASSPERHYTPLPSASRELTSHQGVLGKCRYVY
YGKNSEGNRFIRDDQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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