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Report for CCDS76597.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76597.1 Public Homo sapiens 12 ISCU 24 110 108 CCDS HistoryNCBI Gene:23479Re-query CCDS DB by CCDS ID:76597.1Re-query CCDS DB by GeneID:23479See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76597.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000535729.5 ENSP00000445598.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000535729.5Link to Ensembl Protein Viewer:ENSP00000445598.1Re-query CCDS DB by Nucleotide ID:ENST00000535729Re-query CCDS DB by Protein ID:ENSP00000445598
Original member Current member EBI ENST00000547005.5 ENSP00000446606.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000547005.5Link to Ensembl Protein Viewer:ENSP00000446606.1Re-query CCDS DB by Nucleotide ID:ENST00000547005Re-query CCDS DB by Protein ID:ENSP00000446606
Original member Current member NCBI NM_001301140.1 NP_001288069.1 Accepted alive Link to Nucleotide Sequence:NM_001301140.1Link to Protein Sequence:NP_001288069.1Re-query CCDS DB by Nucleotide ID:NM_001301140Re-query CCDS DB by Protein ID:NP_001288069Link to BLAST:NP_001288069.1
Original member Current member NCBI NM_001320042.1 NP_001306971.1 Accepted alive Link to Nucleotide Sequence:NM_001320042.1Link to Protein Sequence:NP_001306971.1Re-query CCDS DB by Nucleotide ID:NM_001320042Re-query CCDS DB by Protein ID:NP_001306971Link to BLAST:NP_001306971.1

Chromosomal Locations for CCDS 76597.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 108562623 108562736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 108564279 108564392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 108565321 108565431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 108567190 108567268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 108567658 108567704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (465 nt):
ATGGCGGCGGCTGGGGCTTTCCGTCTGAGGCGGGCGGCATCGGCTCTGCTGCTGCGGAGCCCCCGCCTGC
CCGCCCGGGAGCTGTCGGCCCCGGCCCGACTCTATCACAAGAAGGTTGTTGATCATTATGAAAATCCTAG
AAACGTGGGGTCCCTTGACAAGACATCTAAAAATGTTGGAACTGGACTGGTGGGGGCTCCAGCATGTGGT
GACGTAATGAAATTACAGATTCAAGTGGATGAAAAGGGGAAGATTGTGGATGCTAGGTTTAAAACATTTG
GCTGTGGTTCCGCAATTGCCTCCAGCTCATTAGCCACTGAATGGGTGAAAGGAAAGACGGTGGAGGAAGC
CTTGACTATCAAAAACACAGATATCGCCAAGGAGCTCTGCCTTCCTCCCGTGAAACTGCACTGCTCCAAA
TCTGTGCTGTTTCCAGCAGAGGAGAAAACTCAGCTTTCGCCATAA

Translation (154 aa):
MAAAGAFRLRRAASALLLRSPRLPARELSAPARLYHKKVVDHYENPRNVGSLDKTSKNVGTGLVGAPACG
DVMKLQIQVDEKGKIVDARFKTFGCGSAIASSSLATEWVKGKTVEEALTIKNTDIAKELCLPPVKLHCSK
SVLFPAEEKTQLSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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