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Report for CCDS76619.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76619.1 Public Homo sapiens 12 CCDC92 24 110 108 CCDS HistoryNCBI Gene:80212Re-query CCDS DB by CCDS ID:76619.1Re-query CCDS DB by GeneID:80212See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76619.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000545135.5 ENSP00000439526.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000545135.5Link to Ensembl Protein Viewer:ENSP00000439526.1Re-query CCDS DB by Nucleotide ID:ENST00000545135Re-query CCDS DB by Protein ID:ENSP00000439526
Original member Current member EBI ENST00000545891.5 ENSP00000440024.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000545891.5Link to Ensembl Protein Viewer:ENSP00000440024.1Re-query CCDS DB by Nucleotide ID:ENST00000545891Re-query CCDS DB by Protein ID:ENSP00000440024
Original member Current member NCBI NM_001304961.2 NP_001291890.1 Accepted alive Link to Nucleotide Sequence:NM_001304961.2Link to Protein Sequence:NP_001291890.1Re-query CCDS DB by Nucleotide ID:NM_001304961Re-query CCDS DB by Protein ID:NP_001291890Link to BLAST:NP_001291890.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001291890.1 314 Q53HC0-2 314 100% 0 0

Chromosomal Locations for CCDS 76619.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 123937058 123937830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123942744 123942785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123943347 123943476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGGCAGCCACAAACCTGGAGAACCAGCTGCACAGCGCACAGAAGAACCTCCTGTTCCTTCAGCGGGAGC
ATGCCAGCACGCTCAAGGGGCTGCACTCCGAGATCAGGCGGCTGCAGCAGCACTGCACAGATTTAACATA
TGAGCTGACAGTCAAAAGTTCGGAACAGACAGGAGACGGGACTTCTAAAAGCAGTGAATTAAAGAAAAGA
TGTGAAGAGCTGGAAGCCCAACTGAAAGTGAAAGAGAACGAAAATGCTGAGTTGTTGAAAGAACTGGAGC
AGAAAAACGCGATGATCACAGTGCTGGAGAACACCATCAAGGAGCGAGAGAAGAAGTACCTGGAGGAGCT
GAAGGCCAAGAGTCACAAGCTGACCCTGCTGTCTAGCGAGCTGGAGCAGCGGGCCAGCACCATCGCCTAC
CTGACCTCCCAGCTGCACGCCGCCAAGAAGAAGCTCATGAGCTCCAGCGGGACCTCAGATGCCAGCCCGT
CAGGGAGCCCCGTGCTGGCCAGCTACAAGCCAGCGCCCCCCAAAGACAAGCTACCCGAAACGCCTCGCCG
CCGCATGAAAAAGAGCCTCTCAGCCCCCTTGCACCCGGAATTTGAAGAGGTCTACAGATTCGGGGCAGAG
AGCAGGAAACTCCTTTTGCGGGAACCAGTGGATGCTATGCCCGACCCCACCCCATTTCTGCTGGCTAGGG
AGTCCGCCGAGGTCCACCTCATCAAAGAGAGGCCCCTCGTCATCCCCCCCATCGCCTCCGACCGAAGCGG
CGAGCAGCACAGCCCGGCCCGCGAAAAGCCGCACAAGGCCCACGTCGGGGTGGCACATCGGATCCACCAC
GCCACCCCGCCGCAGGCCCAGCCCGAGGTGAAGACCCTGGCGGTCGACCAGGTGAACGGAGGCAAGGTGG
TGAGGAAGCACTCAGGGACGGACAGAACTGTGTGA

Translation (314 aa):
MAATNLENQLHSAQKNLLFLQREHASTLKGLHSEIRRLQQHCTDLTYELTVKSSEQTGDGTSKSSELKKR
CEELEAQLKVKENENAELLKELEQKNAMITVLENTIKEREKKYLEELKAKSHKLTLLSSELEQRASTIAY
LTSQLHAAKKKLMSSSGTSDASPSGSPVLASYKPAPPKDKLPETPRRRMKKSLSAPLHPEFEEVYRFGAE
SRKLLLREPVDAMPDPTPFLLARESAEVHLIKERPLVIPPIASDRSGEQHSPAREKPHKAHVGVAHRIHH
ATPPQAQPEVKTLAVDQVNGGKVVRKHSGTDRTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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