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Report for CCDS7662.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7662.2 Public Homo sapiens 10 TCERG1L 24 110 108 CCDS HistoryNCBI Gene:256536Re-query CCDS DB by CCDS ID:7662.2Re-query CCDS DB by GeneID:256536See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 7662.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368642.4 ENSP00000357631.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000368642.4Link to Ensembl Protein Viewer:ENSP00000357631.4Re-query CCDS DB by Nucleotide ID:ENST00000368642Re-query CCDS DB by Protein ID:ENSP00000357631
Original member Current member NCBI NM_174937.4 NP_777597.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_174937.4Link to Protein Sequence:NP_777597.2Re-query CCDS DB by Nucleotide ID:NM_174937Re-query CCDS DB by Protein ID:NP_777597Link to BLAST:NP_777597.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_777597.2 586 Q5VWI1 586 100% 0 0

Chromosomal Locations for CCDS 7662.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 131093162 131093318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 131098306 131098424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 131104265 131104354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 131116799 131116934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 131134379 131134448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 131146506 131146660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 131163122 131163210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 131166797 131166885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 131260259 131260444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 131308211 131308391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 131309153 131309299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 131311294 131311635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1761 nt):
ATGCAGGCGGGCGCCAGGTTCCAGCGGCGGCGGCGGCAGCTGCAGCAGCAGCAGCCCCGGCGGCGGCAGC
CT
CTCCTCTGGCCGATGGACGCAGAGCCGCCGCCGCCGCCGCCCTGGGTCTGGATGGTGCCGGGCTCGGC
C
GGGCTGCTCCGGCTCAGCGCGGGGGTCGTGGTTCCCCCGGTGCTGCTCGCCTCGGCCCCGCCGCCCGCG
GCC
CCGCTGCTCCCCGGTCTCCCCGGCTGGCCGGCCCCGAGCGAGCCGGTGCTCCCGCTGCTGCCGCTGC
CC
TCTGCGCCAGACTCCGCCGCCGCCGCCGCCGCGCACCCCTTCCCCGCGCTCCACGGGCAGTGGCTGTT
T
GGTGGCCATTCTCCGTCCCTAGGACTGCCCCCCTCTTCCACAGTGGAGCTGGTGCCCGTCTTCCCACAT
CTC
TGCCCTTCTGCTCTTGCAACCCCTATTGGGAAAAGTTGGATAGACAAAAGGATTCCTAACTGTAAGA
TC
TTTTTTAATAATTCCTTTGCTCTGGACTCAACGTGGATACATCCTGAGGAGTCAAGGTTTTTCCATGG
G
CATGAAAAGCCTCGTTTGCTGGCAAATCAAGTAGCTGTGTCTCTGTCCAGGCCGGCTCCTGCCTCCAGG
CCG
CTCCCCACGGTGGTGTTAGCACCTCAGCCCATCCCAGGTGGCTGCCATAACAGCCTTAAGGTGACCA
GC
AGCCCCGCCATTGCCATCGCCACCGCCGCCGCCGCTGCCATGGTCTCCGTGGACCCTGAGAACCTCCG
G
GGCCCGTCCCCCTCCAGCGTGCAGCCGCGCCACTTCCTGACCTTGGCACCCATCAAAATACCCCTCCGG
ACG
TCCCCCGTCTCAGATACAAGGACAGAGCGGGGCCGAGTGGCCCGCCCTCCTGCCCTGATGCTGCGGG
CC
CAGAAGAGCCGGGATGGAGACAAAGAAGACAAGGAGCCTCCACCGATGCTGGGGGGAGGAGAGGACAG
C
ACAGCCAGAGGCAACAGGCCAGTGGCCTCCACCCCGGTGCCCGGATCCCCCTGGTGTGTGGTCTGGACG
GGC
GATGACCGAGTTTTCTTCTTCAACCCAACGATGCACCTGTCTGTCTGGGAGAAGCCCATGGACCTGA
AG
GACCGCGGAGACCTCAACAGGATCATTGAGGACCCGCCCCACAAACGCAAGCTGGAGGCACCAGCAAC
T
GACAACAGCGATGGGTCCAGTTCTGAAGACAACAGGGAAGACCAAGATGTGAAAACCAAGAGGAACCGG
ACC
GAAGGCTGCGGGAGTCCCAAGCCAGAGGAGGCAAAGAGAGAGGACAAAGGCACAAGGACGCCGCCCC
CG
CAGATCCTCCTGCCTCTGGAGGAGCGTGTGACCCACTTCCGAGACATGCTGCTGGAGAGAGGGGTATC
A
GCATTTTCTACCTGGGAGAAAGAATTACACAAAATCGTGTTTGACCCACGCTATCTCCTGCTCAACTCT
GAG
GAACGAAAGCAGATATTTGAACAGTTTGTCAAGACAAGAATAAAAGAAGAATACAAGGAAAAGAAAA
GT
AAATTGCTGCTAGCCAAAGAAGAATTCAAGAAACTTCTAGAGGAATCTAAAGTGTCTCCCAGGACCAC
G
TTTAAGGAGTTTGCAGAGAAATACGGCCGGGATCAGAGGTTCCGACTTGTTCAAAAAAGAAAGGACCAG
GAG
CATTTTTTCAACCAATTCATACTTATTCTTAAGAAACGGGACAAGGAAAACAGACTAAGGCTGCGGA
AA
ATGAGATGA


Translation (586 aa):
MQAGARFQRRRRQLQQQQPRRRQPLLWPMDAEPPPPPPWVWMVPGSAGLLRLSAGVVVPPVLLASAPPPA
A
PLLPGLPGWPAPSEPVLPLLPLPSAPDSAAAAAAHPFPALHGQ
WLFGGHSPSLGLPPSSTVELVPVFPH
L
CPSALATPIGKSWIDKRIPNCK
IFFNNSFALDSTWIHPEESRFFHGHEKPRLLANQVAVSLSRPAPASR
P
LPTVVLAPQPIP
GGCHNSLKVTSSPAIAIATAAAAAMVSVDPENLRGPSPSSVQPRHFLTLAPIKIPLR
T
SPVS
DTRTERGRVARPPALMLRAQKSRDGDKEDKEPPPMLGGGEDSTARGNRPVASTPVPGSPWCVVWT
G
DDRVFFFNPTMHLSVWEKPMDLKDRGDLNRIIEDPPHKRKLEAPA
TDNSDGSSSEDNREDQDVKTKRNR
T
EGCGSPKPEEAKREDKGTRTPPPQILLPLEERVTHFRDMLLERG
VSAFSTWEKELHKIVFDPRYLLLNS
E
ERKQ
IFEQFVKTRIKEEYKEKKSKLLLAKEEFKKLLEESKVSPRTTFKEFAEKYGRDQRFRLVQKRKDQ
E
HFFNQFILILKKRDKENRLRLRKMR




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser