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Report for CCDS76636.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76636.1 Public Homo sapiens 13 INTS6 24 110 108 CCDS HistoryNCBI Gene:26512Re-query CCDS DB by CCDS ID:76636.1Re-query CCDS DB by GeneID:26512See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76636.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000497989.5 ENSP00000419871.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000497989.5Link to Ensembl Protein Viewer:ENSP00000419871.1Re-query CCDS DB by Nucleotide ID:ENST00000497989Re-query CCDS DB by Protein ID:ENSP00000419871
Original member Current member NCBI NM_001306091.2 NP_001293020.1 Accepted alive Link to Nucleotide Sequence:NM_001306091.2Link to Protein Sequence:NP_001293020.1Re-query CCDS DB by Nucleotide ID:NM_001306091Re-query CCDS DB by Protein ID:NP_001293020Link to BLAST:NP_001293020.1

Chromosomal Locations for CCDS 76636.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 51365752 51365845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51367805 51367898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51368939 51369310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51374208 51374439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51374654 51374796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51376048 51376174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51378239 51378454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51379462 51379572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51382029 51382123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51383329 51383461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51383589 51383741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51387386 51387540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51389319 51389444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51395300 51395378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2130 nt):
ATGTCAGTAGAATCAGAACAGTTGACAGGTGTGCCTTTAGATGACTCTGCAATCACACCAATGTGTGAAG
TGACAGGCGGCCGTTCATATTCTGTGTGTTCTCCAAGAATGCTTAATCAGTGTCTGGAGTCCTTGGTGCA
GAAAGTACAAAGTGGGGTGGTAATAAACTTTGAAAAAGCAGGACCAGATCCTTCCCCTGTAGAAGATGGG
CAGCCAGATATATCAAGGCCTTTTGGATCTCAGCCTTGGCATAGCTGTCACAAACTCATATATGTCAGAC
CAAATCCTAAAACTGGGGTTCCTATAGGTCATTGGCCTGTTCCAGAGTCTTTTTGGCCAGATCAAAATTC
GCCAACACTACCACCTCGTACATCTCATCCTGTAGTGAAGTTTTCCTGTACAGACTGTGAACCAATGGTT
ATTGATAAACTTCCTTTTGACAAATATGAGTTGGAACCTTCACCACTGACTCAATTTATCCTGGAAAGGA
AATCTCCTCAAACATGTTGGCAGGTGTACGTGAGCAATAGTGCAAAATACAGTGAACTTGGTCATCCTTT
TGGTTACTTGAAAGCCAGTACAGCACTGAACTGTGTCAACTTATTTGTGATGCCTTACAATTATCCAGTC
CTTCTTCCCCTCTTAGATGACTTGTTTAAAGTGCATAAAGCAAAACCAACATTGAAGTGGAGACAGTCAT
TTGAAAGTTATTTGAAGACAATGCCTCCCTACTATCTTGGGCCCTTGAAGAAAGCTGTTAGGATGATGGG
AGCACCTAACCTAATAGCAGACAGTATGGAATATGGACTTAGTTACAGTGTCATTTCATACCTCAAAAAA
CTGAGTCAACAGGCCAAAATAGAATCTGATCGAGTCATTGGATCTGTAGGCAAAAAAGTAGTACAGGAGA
CTGGAATAAAAGTCCGGAGCCGATCACATGGTTTATCAATGGCATATAGGAAAGATTTTCAACAACTCCT
CCAGGGAATTTCAGAGGATGTCCCTCACAGACTGCTAGACCTTAATATGAAGGAATACACTGGGTTCCAA
GTTGCTTTGCTGAATAAGGATTTGAAGCCACAGACATTTAGAAATGCTTATGACATACCAAGACGAAATC
TTTTGGATCACTTAACAAGAATGAGATCTAATCTTTTGAAGAGCACTCGCAGATTTCTGAAAGGACAGGA
CGAAGATCAAGTGCACAGTGTTCCTATAGCACAAATGGGGAACTACCAGGAATACCTCAAGCAAGTACCT
TCTCCACTAAGAGAACTTGATCCTGATCAGCCACGAAGGTTGCATACATTTGGCAACCCCTTTAAGCTGG
ATAAGAAGGGTATGATGATAGATGAAGCAGATGAATTTGTGGCTGGACCTCAAAATAAACATAAACGACC
CGGAGAACCAAATATGCAAGGGATCCCTAAAAGACGTCGGTGTATGTCTCCACTACTAAGAGGCAGACAG
CAGAATCCTGTTGTAAACAATCATATTGGGGGAAAAGGACCACCTGCACCTACAACTCAAGCACAGCCAG
ATCTTATTAAACCTCTTCCTCTTCATAAAATTTCAGAAACCACTAATGATTCGATAATACATGATGTGGT
TGAAAATCATGTTGCAGACCAACTTTCATCAGACATTACACCAAATGCTATGGATACGGAATTTTCAGCA
TCTTCTCCAGCCAGTTTACTGGAACGGCCAACCAATCATATGGAGGCTCTTGGTCATGACCATTTAGGAA
CCAATGACCTCACTGTTGGTGGATTTTTAGAAAATCATGAGGAGCCAAGAGATAAAGAACAATGTGCTGA
AGAGAACATACCAGCATCTTCACTCAACAAAGGAAAGAAATTGATGCATTGCAGAAGCCATGAAGAGGTC
AATACTGAACTAAAAGCACAAATAATGAAAGAGATCCGAAAGCCAGGAAGAAAATATGAAAGAATCTTCA
CTTTACTGAAGCATGTGCAAGGCAGTTTACAAACAAGACTAATATTTTTACAAAATGTCATTAAAGAAGC
ATCAAGGTTTAAAAAACGAATGCTAATAGAACAACTGGAGAACTTCTTGGATGAAATTCATCGAAGAGCC
AATCAGATCAACCATATTAATAGCAATTAA

Translation (709 aa):
MSVESEQLTGVPLDDSAITPMCEVTGGRSYSVCSPRMLNQCLESLVQKVQSGVVINFEKAGPDPSPVEDG
QPDISRPFGSQPWHSCHKLIYVRPNPKTGVPIGHWPVPESFWPDQNSPTLPPRTSHPVVKFSCTDCEPMV
IDKLPFDKYELEPSPLTQFILERKSPQTCWQVYVSNSAKYSELGHPFGYLKASTALNCVNLFVMPYNYPV
LLPLLDDLFKVHKAKPTLKWRQSFESYLKTMPPYYLGPLKKAVRMMGAPNLIADSMEYGLSYSVISYLKK
LSQQAKIESDRVIGSVGKKVVQETGIKVRSRSHGLSMAYRKDFQQLLQGISEDVPHRLLDLNMKEYTGFQ
VALLNKDLKPQTFRNAYDIPRRNLLDHLTRMRSNLLKSTRRFLKGQDEDQVHSVPIAQMGNYQEYLKQVP
SPLRELDPDQPRRLHTFGNPFKLDKKGMMIDEADEFVAGPQNKHKRPGEPNMQGIPKRRRCMSPLLRGRQ
QNPVVNNHIGGKGPPAPTTQAQPDLIKPLPLHKISETTNDSIIHDVVENHVADQLSSDITPNAMDTEFSA
SSPASLLERPTNHMEALGHDHLGTNDLTVGGFLENHEEPRDKEQCAEENIPASSLNKGKKLMHCRSHEEV
NTELKAQIMKEIRKPGRKYERIFTLLKHVQGSLQTRLIFLQNVIKEASRFKKRMLIEQLENFLDEIHRRA
NQINHINSN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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