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Report for CCDS76728.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76728.1 Public Homo sapiens 15 GOLGA6L2 24 110 108 CCDS HistoryNCBI Gene:283685Re-query CCDS DB by CCDS ID:76728.1Re-query CCDS DB by GeneID:283685See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76728.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000567107.6 ENSP00000454407.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000567107.6Link to Ensembl Protein Viewer:ENSP00000454407.1Re-query CCDS DB by Nucleotide ID:ENST00000567107Re-query CCDS DB by Protein ID:ENSP00000454407
Original member Current member NCBI NM_001304388.2 NP_001291317.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001304388.2Link to Protein Sequence:NP_001291317.1Re-query CCDS DB by Nucleotide ID:NM_001304388Re-query CCDS DB by Protein ID:NP_001291317Link to BLAST:NP_001291317.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001291317.1 909 Q8N9W4-3 909 100% 0 0

Chromosomal Locations for CCDS 76728.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 23439745 23441682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23441979 23442120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23442450 23442508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23443777 23444073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23444162 23444212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23444471 23444500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23445310 23445438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23447098 23447181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2730 nt):
ATGTGGCCCCAACCCCACCTCCCTCCCCACCCCATGATGTCAGAAAAAACCAGACAGAACAAATTGGCTG
AGGCCAAGAAAAAGTTTACAGACTATCGTCAGTGGAACATTGCTGGTGTTGGTACCAGAGCAACTGACAC
CAAAAAGAAGAAAATAAATAATGGCACTAACCCTGAGACAACCACTTCGGAGGGTTGCCATTCACCTGAG
GATACACAACAGAACCGAGCGCAGCTGAAAGAAGAAAAGAAGGCAAGCCACCAACATCAGGAAGCCCTAA
GGCGGGAGATAGAGGCCCAGGATCATACAATACGAATTCTCACGTGTCAGAAAACTGAACTGGAGACAGC
GCTCTATTACAGCCAGGATGCTGCCAGGAAATTTGAAGATGGGAACCTGGGCACCCCATCATCCTTCAAC
CTGGCACTTTCACAGGCCTTTAGGGGGAGTCCTTTGGGCTGTGTCTCAACCTCTCTCATTCCAGGAGAGT
CCAAGGATCTCGCCGGCCGCTTGCATCATTCCTGGCACTTTGCAGGAGAGTTACAGCGGGCTCTCTCTGC
TGTGTCCACATGGCACAAGAAGGCAGACAGGTACATCGAGGAGTTAACAAAGGAGAGGGACGCCCTGAGT
CTGGAACTGTACAGGAACACCATAACCAATGAGGAGCTGAAGAAGAAAAATGCCGAACTACAAGAAAAAC
TTCGACTTGCAGAATCTGAAAAGTCTGAGATCCAGCTCAACGTGAAGGAGCTAAAAAGGAAACTGGAGAG
GGCCAAGTTCCTGCTGCCACAGGTTCAAACCAACACTTTGCAGGAGGAGATGTGGAGGCAGGAGGAGGAG
CTACGGGAGCAGGAAAAGAAGATACGGAAGCAGGAGGAGAAGATGTGGAGACAGGAGGAGAGACTGCGGG
AGCAGGAGGGGAAGATGCGGGAGCAGGAGGAGAAGATGCGGAGACAGGAGAAGAGGCTGCGAGAGCAGGA
GAAGGAGCTGCGGGAGCAGGAGAAGGAGCTGCGGGAGCAGAAGAAGCTGCGGGAGCAGGAGGAGCAGATG
CAGGAGCAGGAGGAGAAGATGTGGGAGCAGGAGGAGAAGATGCGGGAGCAGGAAGAGAAGATGTGGAGAC
AGGAGGAGAGGCTGTGGGAGCAGGAGAAGCAGATGCGGGAGCAGGAGCAGAAGATGCGGGACCAAGAGGA
GAGGATGTGGGAGCAGGACGAGAGGCTACGGGAGAAGGAGGAGAGGATGCGGGAGCAGGAGAAGATGTGG
GAGCAGGTGGAGAAGATGCGGGAGGAGAAGAAGATGCAGGAGCAGGAGAAGAAGACGCGGGACCAGGAGG
AGAAGATGCAAGAGGAGGAGAGGATACGGGAGCGGGAGAAGAAGATGCGGGAAGAGGAGGAGACGATGCG
GGAGCAGGAGGAGAAGATGCAGAAGCAGGAGGAGAATATGTGGGAGCAGGAAGAGAAGGAGTGGCAGCAG
CAGAGGCTGCCGGAACAGAAGGAGAAGCTGTGGGAACAGGAGAAGATGCAGGAGCAGGAGGAGAAGATAT
GGGAGCAGGAGGAGAAGATACGGGACCAGGAGGAGATGTGGGGGCAGGAGAAGAAGATGTGGCGGCAGGA
GAAGATGCGGGAGCAGGAAGATGTGGAGACAGGAGGAGAGGCTGCAGGAGCAGGAGAAGCAGATGTGGGA
GCAGGAGGAGAAGATGCGGGATCAGGAGCAGAAGATGTGGGACCAGGAGGAGAGGATGTGGGAGCAGGAC
GAGAGGCTGCGGGAGAAGGAGGAGAGAATGCGGGAGCAGAAGAAGATGTGGCAGCAGGAGGAGAAGATGC
GGGAGGAGAAGAAGACGCAGGAGCAGGAGAAGAAGACATGGGACCAGGAGGAGAAGATGCGAGAGGAGGA
GAGGATGCGGGAGCGGGAGAAGAAGATGCGGGAGGAGGAGGAGATGATGCGGGAGCAGGAGGAGAAGATG
CAGGAGCAGGAAGAGAAGATGCGGGAGCAGGAGGAGAAGATGTGGGAGCAGGAAGAGAAGATGCAGGAGC
AGGAGGAGAAGATGTGGGAGCAGGAGGAGAAGATGTGGGAGCAGGAAGAAGAAGATGTGGGAGCAGCAGA
GGCTGCCGGAACAGAAGGAGAAGCTGTGGGAACACGAGAAGATGCAGGAGCAGGAGATCAGGAGCAGAAG
ATGTGGGACCAGAAGGAGAGGATGTGGGAGCAGGACGAGAGGCTGCGGGAGAAGGAGGAGAGAATGCGGG
AGCAGAAGATGTGGCAGCAGGTGGAGAAGATGCGGGAGAAGAAGAAGACGCAGGAGGAGAAGATGCAGGA
GCAGCAAGAGAAGATGCAGGAGCAGGAGGAGATGATGTGGGAGCAGGAAGAGAAGATGCAGGAGCAGGAG
GAGAAGATGTGGGAGCAGGAGGAGAAGATGCGGGAGCAGGAGGAGAAGATGCGGGAGCAGGAGGAGAAGA
TGCAGGGCCAGGAGGAGAAGATGCGGGAGCAGGAGGAGAAGATGCAGGGCCAGGAGGAGAAGATGCGGGA
GCAGGAGGAGAAGATGCGGGGCCAGGAGGAGAAGATGTGGGGCCAGGAGGAGAAGATGTGGGGGCAGGAG
GAGAAGATGTGGGGGCAGGAGGAGATGCGAGAGAAGGAGGAGAGGATACGAGATCAGAAAGAGAAGATGC
AGGAGAGGCTGCCAGAGCACGAGGAGCGGTGCTCAGAGCCCTGCCTCCCTCCCTCCAAAGTTCTTTGTAA

Translation (909 aa):
MWPQPHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTRATDTKKKKINNGTNPETTTSEGCHSPE
DTQQNRAQLKEEKKASHQHQEALRREIEAQDHTIRILTCQKTELETALYYSQDAARKFEDGNLGTPSSFN
LALSQAFRGSPLGCVSTSLIPGESKDLAGRLHHSWHFAGELQRALSAVSTWHKKADRYIEELTKERDALS
LELYRNTITNEELKKKNAELQEKLRLAESEKSEIQLNVKELKRKLERAKFLLPQVQTNTLQEEMWRQEEE
LREQEKKIRKQEEKMWRQEERLREQEGKMREQEEKMRRQEKRLREQEKELREQEKELREQKKLREQEEQM
QEQEEKMWEQEEKMREQEEKMWRQEERLWEQEKQMREQEQKMRDQEERMWEQDERLREKEERMREQEKMW
EQVEKMREEKKMQEQEKKTRDQEEKMQEEERIREREKKMREEEETMREQEEKMQKQEENMWEQEEKEWQQ
QRLPEQKEKLWEQEKMQEQEEKIWEQEEKIRDQEEMWGQEKKMWRQEKMREQEDVETGGEAAGAGEADVG
AGGEDAGSGAEDVGPGGEDVGAGREAAGEGGENAGAEEDVAAGGEDAGGEEDAGAGEEDMGPGGEDARGG
EDAGAGEEDAGGGGDDAGAGGEDAGAGREDAGAGGEDVGAGREDAGAGGEDVGAGGEDVGAGRRRCGSSR
GCRNRRRSCGNTRRCRSRRSGAEDVGPEGEDVGAGREAAGEGGENAGAEDVAAGGEDAGEEEDAGGEDAG
AAREDAGAGGDDVGAGREDAGAGGEDVGAGGEDAGAGGEDAGAGGEDAGPGGEDAGAGGEDAGPGGEDAG
AGGEDAGPGGEDVGPGGEDVGAGGEDVGAGGDAREGGEDTRSEREDAGEAARARGAVLRALPPSLQSSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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