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Report for CCDS76806.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76806.1 Public Homo sapiens 16 RAB26 24 110 108 CCDS HistoryNCBI Gene:25837Re-query CCDS DB by CCDS ID:76806.1Re-query CCDS DB by GeneID:25837See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76806.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000541451.5 ENSP00000441580.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000541451.5Link to Ensembl Protein Viewer:ENSP00000441580.1Re-query CCDS DB by Nucleotide ID:ENST00000541451Re-query CCDS DB by Protein ID:ENSP00000441580
Original member Current member NCBI NM_001308053.1 NP_001294982.1 Accepted alive Link to Nucleotide Sequence:NM_001308053.1Link to Protein Sequence:NP_001294982.1Re-query CCDS DB by Nucleotide ID:NM_001308053Re-query CCDS DB by Protein ID:NP_001294982Link to BLAST:NP_001294982.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001294982.1 190 Q9ULW5-2 190 100% 0 0

Chromosomal Locations for CCDS 76806.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 2149944 2150051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2151569 2151610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2151695 2151761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2151856 2151908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2152820 2152885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2152989 2153045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2153146 2153222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2153319 2153421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (573 nt):
ATGCTGGTGGGGGACTCGGGTGTGGGGAAGACCTGTCTGCTGGTGCGATTCAAGGATGGTGCTTTCCTGG
CGGGGACCTTCATCTCCACCGTAGGCATTGACTTCCGGAACAAAGTTCTGGACGTGGATGGTGTGAAGGT
GAAGCTGCAGATGTGGGACACAGCTGGTCAGGAGCGGTTCCGCAGTGTTACCCATGCCTACTACCGGGAT
GCTCATGCTCTGCTGCTGCTCTACGATGTCACCAACAAGGCCTCCTTTGACAACATCCAGGCCTGGCTGA
CCGAGATCCACGAGTACGCCCAGCACGACGTGGCGCTCATGCTGCTGGGGAACAAGGTGGACTCTGCCCA
TGAGCGTGTGGTGAAGAGGGAGGACGGGGAGAAGCTGGCCAAGGAGTATGGACTGCCCTTCATGGAGACC
AGCGCCAAGACGGGCCTCAACGTGGACTTGGCCTTCACAGCCATAGCAAAGGAGTTGAAGCAGCGCTCCA
TGAAGGCTCCCAGCGAGCCGCGCTTCCGGCTGCATGATTACGTTAAGAGGGAGGGTCGAGGGGCCTCCTG
CTGCCGCCCTTGA

Translation (190 aa):
MLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRD
AHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMET
SAKTGLNVDLAFTAIAKELKQRSMKAPSEPRFRLHDYVKREGRGASCCRP


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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