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Report for CCDS76811.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76811.1 Public Homo sapiens 16 IL32 24 110 108 CCDS HistoryNCBI Gene:9235Re-query CCDS DB by CCDS ID:76811.1Re-query CCDS DB by GeneID:9235See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76811.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396890.6 ENSP00000380099.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396890.6Link to Ensembl Protein Viewer:ENSP00000380099.2Re-query CCDS DB by Nucleotide ID:ENST00000396890Re-query CCDS DB by Protein ID:ENSP00000380099
Original member Current member EBI ENST00000534507.5 ENSP00000431775.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000534507.5Link to Ensembl Protein Viewer:ENSP00000431775.1Re-query CCDS DB by Nucleotide ID:ENST00000534507Re-query CCDS DB by Protein ID:ENSP00000431775
Original member Current member EBI ENST00000548476.5 ENSP00000449483.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000548476.5Link to Ensembl Protein Viewer:ENSP00000449483.1Re-query CCDS DB by Nucleotide ID:ENST00000548476Re-query CCDS DB by Protein ID:ENSP00000449483
Original member Current member NCBI NM_001308078.4 NP_001295007.1 Accepted alive Link to Nucleotide Sequence:NM_001308078.4Link to Protein Sequence:NP_001295007.1Re-query CCDS DB by Nucleotide ID:NM_001308078Re-query CCDS DB by Protein ID:NP_001295007Link to BLAST:NP_001295007.1
Original member Current member NCBI NM_001369587.3 NP_001356516.1 Accepted alive Link to Nucleotide Sequence:NM_001369587.3Link to Protein Sequence:NP_001356516.1Re-query CCDS DB by Nucleotide ID:NM_001369587Re-query CCDS DB by Protein ID:NP_001356516Link to BLAST:NP_001356516.1
Original member Current member NCBI NM_001369588.3 NP_001356517.1 Accepted alive Link to Nucleotide Sequence:NM_001369588.3Link to Protein Sequence:NP_001356517.1Re-query CCDS DB by Nucleotide ID:NM_001369588Re-query CCDS DB by Protein ID:NP_001356517Link to BLAST:NP_001356517.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001295007.1 234 P24001-1 234 100% 0 0
NP_001356516.1 234 P24001-1 234 100% 0 0
NP_001356517.1 234 P24001-1 234 100% 0 0

Chromosomal Locations for CCDS 76811.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 3065812 3065826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3067377 3067613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3067984 3068010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3068180 3068239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3068990 3069355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (705 nt):
ATGTGCTTCCCGAAGGTCCTCTCTGATGACATGAAGAAGCTGAAGGCCCGAATGGTAATGCTCCTCCCTA
CTTCTGCTCAGGGGTTGGGGGCCTGGGTCTCAGCGTGTGACACTGAGGACACTGTGGGACACCTGGGACC
CTGGAGGGACAAGGATCCGGCCCTTTGGTGCCAACTCTGCCTCTCTTCACAGCACCAGGCCATAGAAAGA
TTTTATGATAAAATGCAAAATGCAGAATCAGGACGTGGACAGGTGATGTCGAGCCTGGCAGAGCTGGAGG
ACGACTTCAAAGAGGGCTACCTGGAGACAGTGGCGGCTTATTATGAGGAGCAGCACCCAGAGCTCACTCC
TCTACTTGAAAAAGAAAGAGATGGATTACGGTGCCGAGGCAACAGATCCCCTGTCCCGGATGTTGAGGAT
CCCGCAACCGAGGAGCCTGGGGAGAGCTTTTGTGACAAGGTCATGAGATGGTTCCAGGCCATGCTGCAGC
GGCTGCAGACCTGGTGGCACGGGGTTCTGGCCTGGGTGAAGGAGAAGGTGGTGGCCCTGGTCCATGCAGT
GCAGGCCCTCTGGAAACAGTTCCAGAGTTTCTGCTGCTCTCTGTCAGAGCTCTTCATGTCCTCTTTCCAG
TCCTACGGAGCCCCACGGGGGGACAAGGAGGAGCTGACACCCCAGAAGTGCTCTGAACCCCAATCCTCAA
AATGA

Translation (234 aa):
MCFPKVLSDDMKKLKARMVMLLPTSAQGLGAWVSACDTEDTVGHLGPWRDKDPALWCQLCLSSQHQAIER
FYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAAYYEEQHPELTPLLEKERDGLRCRGNRSPVPDVED
PATEEPGESFCDKVMRWFQAMLQRLQTWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQ
SYGAPRGDKEELTPQKCSEPQSSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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