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Report for CCDS7695.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7695.1 Public Homo sapiens 11 PKP3 24 110 108 CCDS HistoryNCBI Gene:11187Re-query CCDS DB by CCDS ID:7695.1Re-query CCDS DB by GeneID:11187See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7695.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331563.7 ENSP00000331678.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000331563.7Link to Ensembl Protein Viewer:ENSP00000331678.2Re-query CCDS DB by Nucleotide ID:ENST00000331563Re-query CCDS DB by Protein ID:ENSP00000331678
Original member Current member NCBI NM_007183.4 NP_009114.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007183.4Link to Protein Sequence:NP_009114.1Re-query CCDS DB by Nucleotide ID:NM_007183Re-query CCDS DB by Protein ID:NP_009114Link to BLAST:NP_009114.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_009114.1 797 Q9Y446-1 797 100% 0 0

Chromosomal Locations for CCDS 7695.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 394293 394524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 396608 396687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 396814 397445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 397539 397662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 398992 399196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 399967 400141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 400334 400451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 400535 400705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 403078 403263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 403618 403771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 403943 404135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 404236 404323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 404534 404569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2394 nt):
ATGCAGGACGGTAACTTCCTGCTGTCGGCCCTGCAGCCTGAGGCCGGCGTGTGCTCCCTGGCGCTGCCCT
CTGACCTGCAGCTGGACCGCCGGGGCGCCGAGGGGCCGGAGGCCGAGCGGCTGCGGGCAGCCCGCGTCCA
GGAGCAGGTCCGCGCCCGCCTCTTGCAGCTGGGACAGCAGCCGCGGCACAACGGGGCCGCTGAGCCCGAG
CCTGAGGCCGAGACTGCCAGAGGCACATCCAGGGGGCAGTACCACACCCTGCAGGCTGGCTTCAGCTCTC
GCTCTCAGGGCCTGAGTGGGGACAAGACCTCGGGCTTCCGGCCCATCGCCAAGCCGGCCTACAGCCCAGC
CTCCTGGTCCTCCCGCTCCGCCGTGGATCTGAGCTGCAGTCGGAGGCTGAGTTCAGCCCACAACGGGGGC
AGCGCCTTTGGGGCCGCTGGGTACGGGGGTGCCCAGCCCACCCCTCCCATGCCCACCAGGCCCGTGTCCT
TCCATGAGCGCGGTGGGGTTGGGAGCCGGGCCGACTATGACACACTCTCCCTGCGCTCGCTGCGGCTGGG
GCCCGGGGGCCTGGACGACCGCTACAGCCTGGTGTCTGAGCAGCTGGAGCCCGCGGCCACCTCCACCTAC
AGGGCCTTTGCGTACGAGCGCCAGGCCAGCTCCAGCTCCAGCCGGGCAGGGGGGCTGGACTGGCCCGAGG
CCACTGAGGTTTCCCCGAGCCGGACCATCCGTGCCCCTGCCGTGCGGACCCTGCAGCGATTCCAGAGCAG
CCACCGGAGCCGCGGGGTAGGCGGGGCAGTGCCGGGGGCCGTCCTGGAGCCAGTGGCTCGAGCGCCATCT
GTGCGCAGCCTCAGCCTCAGCCTGGCTGACTCGGGCCACCTGCCGGACGTGCATGGGTTCAACAGCTACG
GTAGCCACCGAACCCTGCAGAGACTCAGCAGCGGTTTTGATGACATTGACCTGCCCTCAGCAGTCAAGTA
CCTCATGGCTTCAGACCCCAACCTGCAGGTGCTGGGAGCGGCCTACATCCAGCACAAGTGCTACAGCGAT
GCAGCCGCCAAGAAGCAGGCCCGCAGCCTTCAGGCCGTGCCTAGGCTGGTGAAGCTCTTCAACCACGCCA
ACCAGGAAGTGCAGCGCCATGCCACAGGTGCCATGCGCAACCTCATCTACGACAACGCTGACAACAAGCT
GGCCCTGGTGGAGGAGAACGGGATCTTCGAGCTGCTGCGGACACTGCGGGAGCAGGATGATGAGCTTCGC
AAAAATGTCACAGGGATCCTGTGGAACCTTTCATCCAGCGACCACCTGAAGGACCGCCTGGCCAGAGACA
CGCTGGAGCAGCTCACAGACCTGGTGTTGAGCCCCCTGTCGGGGGCTGGGGGTCCCCCCCTCATCCAGCA
GAACGCCTCGGAGGCAGAGATCTTCTACAACGCCACCGGCTTCCTCAGGAACCTCAGCTCAGCCTCTCAG
GCCACTCGCCAGAAGATGCGGGAGTGCCACGGGCTGGTGGACGCCCTGGTCACCTCTATCAACCACGCCC
TGGACGCGGGCAAATGCGAGGACAAGAGCGTGGAGAACGCGGTGTGCGTCCTGCGGAACCTGTCCTACCG
CCTCTACGACGAGATGCCGCCGTCCGCGCTGCAGCGGCTGGAGGGTCGCGGCCGCAGGGACCTGGCGGGG
GCGCCGCCGGGAGAGGTCGTGGGCTGCTTCACGCCGCAGAGCCGGCGGCTGCGCGAGCTGCCCCTCGCCG
CCGATGCGCTCACCTTCGCGGAGGTGTCCAAGGACCCCAAGGGCCTCGAGTGGCTGTGGAGCCCCCAGAT
CGTGGGGCTGTACAACCGGCTGCTGCAGCGCTGCGAGCTCAACCGGCACACGACGGAGGCGGCCGCCGGG
GCGCTGCAGAACATCACGGCAGGCGACCGCAGGTGGGCGGGGGTGCTGAGCCGCCTGGCCCTGGAGCAGG
AGCGTATTCTGAACCCCCTGCTAGACCGTGTCAGGACCGCCGACCACCACCAGCTGCGCTCACTGACTGG
CCTCATCCGAAACCTGTCTCGGAACGCTAGGAACAAGGACGAGATGTCCACGAAGGTGGTGAGCCACCTG
ATCGAGAAGCTGCCGGGCAGCGTGGGTGAGAAGTCGCCCCCAGCCGAGGTGCTGGTCAACATCATAGCTG
TGCTCAACAACCTGGTGGTGGCCAGCCCCATCGCTGCCCGAGACCTGCTGTATTTTGACGGACTCCGAAA
GCTCATCTTCATCAAGAAGAAGCGGGACAGCCCCGACAGTGAGAAGTCCTCCCGGGCAGCATCCAGCCTC
CTGGCCAACCTGTGGCAGTACAACAAGCTCCACCGTGACTTCCGGGCGAAGGGCTATCGGAAGGAGGACT
TCCTGGGCCCATAG

Translation (797 aa):
MQDGNFLLSALQPEAGVCSLALPSDLQLDRRGAEGPEAERLRAARVQEQVRARLLQLGQQPRHNGAAEPE
PEAETARGTSRGQYHTLQAGFSSRSQGLSGDKTSGFRPIAKPAYSPASWSSRSAVDLSCSRRLSSAHNGG
SAFGAAGYGGAQPTPPMPTRPVSFHERGGVGSRADYDTLSLRSLRLGPGGLDDRYSLVSEQLEPAATSTY
RAFAYERQASSSSSRAGGLDWPEATEVSPSRTIRAPAVRTLQRFQSSHRSRGVGGAVPGAVLEPVARAPS
VRSLSLSLADSGHLPDVHGFNSYGSHRTLQRLSSGFDDIDLPSAVKYLMASDPNLQVLGAAYIQHKCYSD
AAAKKQARSLQAVPRLVKLFNHANQEVQRHATGAMRNLIYDNADNKLALVEENGIFELLRTLREQDDELR
KNVTGILWNLSSSDHLKDRLARDTLEQLTDLVLSPLSGAGGPPLIQQNASEAEIFYNATGFLRNLSSASQ
ATRQKMRECHGLVDALVTSINHALDAGKCEDKSVENAVCVLRNLSYRLYDEMPPSALQRLEGRGRRDLAG
APPGEVVGCFTPQSRRLRELPLAADALTFAEVSKDPKGLEWLWSPQIVGLYNRLLQRCELNRHTTEAAAG
ALQNITAGDRRWAGVLSRLALEQERILNPLLDRVRTADHHQLRSLTGLIRNLSRNARNKDEMSTKVVSHL
IEKLPGSVGEKSPPAEVLVNIIAVLNNLVVASPIAARDLLYFDGLRKLIFIKKKRDSPDSEKSSRAASSL
LANLWQYNKLHRDFRAKGYRKEDFLGP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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