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Report for CCDS7717.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7717.1 Public Homo sapiens 11 RPLP2 24 110 108 CCDS HistoryNCBI Gene:6181Re-query CCDS DB by CCDS ID:7717.1Re-query CCDS DB by GeneID:6181See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7717.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000321153.9 ENSP00000322419.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000321153.9Link to Ensembl Protein Viewer:ENSP00000322419.4Re-query CCDS DB by Nucleotide ID:ENST00000321153Re-query CCDS DB by Protein ID:ENSP00000322419
Original member Current member EBI ENST00000530797.5 ENSP00000431240.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000530797.5Link to Ensembl Protein Viewer:ENSP00000431240.1Re-query CCDS DB by Nucleotide ID:ENST00000530797Re-query CCDS DB by Protein ID:ENSP00000431240
Original member Current member NCBI NM_001004.4 NP_000995.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004.4Link to Protein Sequence:NP_000995.1Re-query CCDS DB by Nucleotide ID:NM_001004Re-query CCDS DB by Protein ID:NP_000995Link to BLAST:NP_000995.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000995.1 115 P05387 115 100% 0 0

Chromosomal Locations for CCDS 7717.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 810235 810357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 811597 811645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 812535 812633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 812760 812836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (348 nt):
ATGCGCTACGTCGCCTCCTACCTGCTGGCTGCCCTAGGGGGCAACTCCTCCCCCAGCGCCAAGGACATCA
AGAAGATCTTGGACAGCGTGGGTATCGAGGCGGACGACGACCGGCTCAACAAGGTTATCAGTGAGCTGAA
TGGAAAAAACATTGAAGACGTCATTGCCCAGGGTATTGGCAAGCTTGCCAGTGTACCTGCTGGTGGGGCT
GTAGCCGTCTCTGCTGCCCCAGGCTCTGCAGCCCCTGCTGCTGGTTCTGCCCCTGCTGCAGCAGAGGAGA
AGAAAGATGAGAAGAAGGAGGAGTCTGAAGAGTCAGATGATGACATGGGATTTGGCCTTTTTGATTAA

Translation (115 aa):
MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAGGA
VAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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