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Report for CCDS77575.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77575.1 Public Homo sapiens 20 CNBD2 24 110 108 CCDS HistoryNCBI Gene:140894Re-query CCDS DB by CCDS ID:77575.1Re-query CCDS DB by GeneID:140894See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77575.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000489667.1 ENSP00000480804.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000489667.1Link to Ensembl Protein Viewer:ENSP00000480804.1Re-query CCDS DB by Nucleotide ID:ENST00000489667Re-query CCDS DB by Protein ID:ENSP00000480804
Original member Current member NCBI NM_001304367.2 NP_001291296.1 Accepted alive Link to Nucleotide Sequence:NM_001304367.2Link to Protein Sequence:NP_001291296.1Re-query CCDS DB by Nucleotide ID:NM_001304367Re-query CCDS DB by Protein ID:NP_001291296Link to BLAST:NP_001291296.1

Chromosomal Locations for CCDS 77575.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 35968763 35968813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 35972629 35972880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (303 nt):
ATGAGGAGACATATGGTAACTTATGCCTGGCAGCTCCTGAAGAAGGAACTGGGACTGTACCAGCTCGCCA
TGGATATCATCATAATGATCCGAGTGTGTAAAATGTTCCGCCAAGGCCTCAGGGGATTCCGGGAATATCA
AATCATTGAGACTGCTCACTGGAAGCACCCTATCTTCTCCTTCTGGGATGTAAGCAGTTGGGCTCAGCAG
GATTATGAGGGCTCAAAGAAGCCCAATAAATTGCATCCCACTTCCTGGCCTAAGCTCAGAACTGAGAAAG
AAGACAAAAGGAAAAGCAGATGA

Translation (100 aa):
MRRHMVTYAWQLLKKELGLYQLAMDIIIMIRVCKMFRQGLRGFREYQIIETAHWKHPIFSFWDVSSWAQQ
DYEGSKKPNKLHPTSWPKLRTEKEDKRKSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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