NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS77678.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77678.1 Public Homo sapiens 22 MIEF1 24 110 108 CCDS HistoryNCBI Gene:54471Re-query CCDS DB by CCDS ID:77678.1Re-query CCDS DB by GeneID:54471See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77678.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000402881.5 ENSP00000385110.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000402881.5Link to Ensembl Protein Viewer:ENSP00000385110.1Re-query CCDS DB by Nucleotide ID:ENST00000402881Re-query CCDS DB by Protein ID:ENSP00000385110
Original member Current member NCBI NM_001304564.2 NP_001291493.1 Accepted alive Link to Nucleotide Sequence:NM_001304564.2Link to Protein Sequence:NP_001291493.1Re-query CCDS DB by Nucleotide ID:NM_001304564Re-query CCDS DB by Protein ID:NP_001291493Link to BLAST:NP_001291493.1

Chromosomal Locations for CCDS 77678.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 39511295 39511438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 39511849 39512026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 39512232 39512494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 39513517 39514224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 39515230 39515373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1437 nt):
ATGGCAGGCGCTGGTGAGCGCAAAGGCAAGAAGGATGACAATGGCATTGGCACGGCCATTGACTTTGTGC
TCTCCAATGCCCGGCTGGTGCTGGGGGTGGGTGGAGCGGCCATGCTGGGCATCGCCACGCTGGCAGTTAA
GCGGATGTACGATCGGGCGATCAGTGCCCCTACCAGCCCCACCCGCCTGAGCCATTCGGGGAAAAGGAGC
TGGGAAGAACCCAACTGGATGGGCTCCCCACGACTGCTGAACAGGGACATGAAGACGGGCCTGAGCCGGT
CCTTGCAGACCCTTCCCACAGACTCCTCCACCTTCGACACAGATACATTCTGCCCGCCCCGGCCCAAGCC
AGTGGCCAGGAAGGGCCAGGTAGACTTGAAGAAGTCACGACTCCGCATGTCCCTGCAGGAGAAACTTCTT
ACTTACTACCGGAACCGGGCAGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCAAGCTGCTGTGGACA
TATGTGCCGAGCTCCGGAGCTTCCTGCGGGCCAAGTTGCCTGACATGCCGCTTCGGGACATGTACTTGAG
TGGCAGCCTCTACGATGACCTGCAGGTGGTGACAGCTGACCACATCCAACTCATTGTGCCCCTTGTGCTG
GAGCAGAACCTGTGGTCATGTATTCCTGGTGAAGACACCATCATGAATGTCCCTGGCTTCTTCCTGGTGC
GTCGTGAGAATCCAGAGTACTTTCCTCGTGGGAGCAGTTACTGGGACCGCTGTGTAGTAGGGGGCTACCT
CTCTCCAAAGACAGTCGCAGATACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGGG
TCCCTCTTGGACTATGTGATCCGCCCGGCCCCACCCCCAGAAGCCCTCACACTGGAGGTGCAGTATGAGC
GTGACAAACATCTCTTCATTGACTTCCTGCCATCAGTGACCCTCGGTGACACAGTCTTGGTGGCCAAACC
ACACCGGCTAGCCCAGTATGACAACCTGTGGCGGCTGAGCCTGCGTCCCGCGGAGACGGCACGCCTGCGG
GCTCTGGACCAGGCTGACTCGGGCTGCCGATCTCTGTGCCTCAAGATCCTCAAGGCCATATGCAAGTCCA
CCCCGGCTCTGGGCCACCTCACTGCCAGCCAGCTAACCAATGTCATCCTCCACTTGGCCCAGGAGGAGGC
TGACTGGTCTCCGGATATGCTGGCCGACCGTTTCCTGCAGGCCTTGAGGGGACTTATCAGCTACTTAGAG
GCTGGAGTCCTGCCCAGTGCCCTAAACCCCAAGGACAAGGCCTTGAAGGAACGCAGCCTTAGACATCAGG
TGAGGATGATGGAGGTAGACAGTCGACTGAATGTCAGCTGGAAAATCCAGTCACTAGTTGGGGTTTGGTG
GCCATGTTTTCTACCCAGACAGGCCCTGCTTTTCTAG

Translation (478 aa):
MAGAGERKGKKDDNGIGTAIDFVLSNARLVLGVGGAAMLGIATLAVKRMYDRAISAPTSPTRLSHSGKRS
WEEPNWMGSPRLLNRDMKTGLSRSLQTLPTDSSTFDTDTFCPPRPKPVARKGQVDLKKSRLRMSLQEKLL
TYYRNRAAIPAGEQARAKQAAVDICAELRSFLRAKLPDMPLRDMYLSGSLYDDLQVVTADHIQLIVPLVL
EQNLWSCIPGEDTIMNVPGFFLVRRENPEYFPRGSSYWDRCVVGGYLSPKTVADTFEKVVAGSINWPAIG
SLLDYVIRPAPPPEALTLEVQYERDKHLFIDFLPSVTLGDTVLVAKPHRLAQYDNLWRLSLRPAETARLR
ALDQADSGCRSLCLKILKAICKSTPALGHLTASQLTNVILHLAQEEADWSPDMLADRFLQALRGLISYLE
AGVLPSALNPKDKALKERSLRHQVRMMEVDSRLNVSWKIQSLVGVWWPCFLPRQALLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH