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Report for CCDS7789.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7789.1 Public Homo sapiens 11 STK33 24 110 108 CCDS HistoryNCBI Gene:65975Re-query CCDS DB by CCDS ID:7789.1Re-query CCDS DB by GeneID:65975See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7789.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000315204.5 ENSP00000320754.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000315204.5Link to Ensembl Protein Viewer:ENSP00000320754.1Re-query CCDS DB by Nucleotide ID:ENST00000315204Re-query CCDS DB by Protein ID:ENSP00000320754
Original member Current member EBI ENST00000396672.5 ENSP00000379905.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396672.5Link to Ensembl Protein Viewer:ENSP00000379905.1Re-query CCDS DB by Nucleotide ID:ENST00000396672Re-query CCDS DB by Protein ID:ENSP00000379905
Original member Current member EBI ENST00000447869.5 ENSP00000416750.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000447869.5Link to Ensembl Protein Viewer:ENSP00000416750.1Re-query CCDS DB by Nucleotide ID:ENST00000447869Re-query CCDS DB by Protein ID:ENSP00000416750
Original member Current member EBI ENST00000687296.1 ENSP00000509322.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000687296.1Link to Ensembl Protein Viewer:ENSP00000509322.1Re-query CCDS DB by Nucleotide ID:ENST00000687296Re-query CCDS DB by Protein ID:ENSP00000509322
Original member Current member NCBI NM_001289061.2 NP_001275990.1 Accepted alive Link to Nucleotide Sequence:NM_001289061.2Link to Protein Sequence:NP_001275990.1Re-query CCDS DB by Nucleotide ID:NM_001289061Re-query CCDS DB by Protein ID:NP_001275990Link to BLAST:NP_001275990.1
Original member Current member NCBI NM_001352387.2 NP_001339316.1 Accepted alive Link to Nucleotide Sequence:NM_001352387.2Link to Protein Sequence:NP_001339316.1Re-query CCDS DB by Nucleotide ID:NM_001352387Re-query CCDS DB by Protein ID:NP_001339316Link to BLAST:NP_001339316.1
Original member Current member NCBI NM_001352388.2 NP_001339317.1 Accepted alive Link to Nucleotide Sequence:NM_001352388.2Link to Protein Sequence:NP_001339317.1Re-query CCDS DB by Nucleotide ID:NM_001352388Re-query CCDS DB by Protein ID:NP_001339317Link to BLAST:NP_001339317.1
Original member Current member NCBI NM_001352389.2 NP_001339318.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001352389.2Link to Protein Sequence:NP_001339318.1Re-query CCDS DB by Nucleotide ID:NM_001352389Re-query CCDS DB by Protein ID:NP_001339318Link to BLAST:NP_001339318.1
Original member Current member NCBI NM_001352390.2 NP_001339319.1 Accepted alive Link to Nucleotide Sequence:NM_001352390.2Link to Protein Sequence:NP_001339319.1Re-query CCDS DB by Nucleotide ID:NM_001352390Re-query CCDS DB by Protein ID:NP_001339319Link to BLAST:NP_001339319.1
Original member Current member NCBI NM_001352391.2 NP_001339320.1 Accepted alive Link to Nucleotide Sequence:NM_001352391.2Link to Protein Sequence:NP_001339320.1Re-query CCDS DB by Nucleotide ID:NM_001352391Re-query CCDS DB by Protein ID:NP_001339320Link to BLAST:NP_001339320.1
Original member Current member NCBI NM_001352392.2 NP_001339321.1 Accepted alive Link to Nucleotide Sequence:NM_001352392.2Link to Protein Sequence:NP_001339321.1Re-query CCDS DB by Nucleotide ID:NM_001352392Re-query CCDS DB by Protein ID:NP_001339321Link to BLAST:NP_001339321.1
Original member Current member NCBI NM_001352393.2 NP_001339322.1 Accepted alive Link to Nucleotide Sequence:NM_001352393.2Link to Protein Sequence:NP_001339322.1Re-query CCDS DB by Nucleotide ID:NM_001352393Re-query CCDS DB by Protein ID:NP_001339322Link to BLAST:NP_001339322.1
Original member Current member NCBI NM_030906.4 NP_112168.1 Accepted alive Link to Nucleotide Sequence:NM_030906.4Link to Protein Sequence:NP_112168.1Re-query CCDS DB by Nucleotide ID:NM_030906Re-query CCDS DB by Protein ID:NP_112168Link to BLAST:NP_112168.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001275990.1 514 Q9BYT3-1 514 100% 0 0
NP_001339316.1 514 Q9BYT3-1 514 100% 0 0
NP_001339317.1 514 Q9BYT3-1 514 100% 0 0
NP_001339318.1 514 Q9BYT3-1 514 100% 0 0
NP_001339319.1 514 Q9BYT3-1 514 100% 0 0
NP_001339320.1 514 Q9BYT3-1 514 100% 0 0
NP_001339321.1 514 Q9BYT3-1 514 100% 0 0
NP_001339322.1 514 Q9BYT3-1 514 100% 0 0
NP_112168.1 514 Q9BYT3-1 514 100% 0 0

Chromosomal Locations for CCDS 7789.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 8392510 8392710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8413495 8413692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8435494 8435579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8436027 8436139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8440678 8440753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8452822 8452906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8454744 8454832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8457341 8457479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8461805 8461909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8464709 8464822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8473163 8473276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8474681 8474905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1545 nt):
ATGGCTGATAGTGGCTTAGATAAAAAATCCACAAAATGCCCCGACTGTTCATCTGCTTCTCAGAAAGATG
TACTTTGTGTATGTTCCAGCAAAACAAGGGTTCCTCCAGTTTTGGTGGTGGAAATGTCACAGACATCAAG
CATTGGTAGTGCAGAATCTTTAATTTCACTGGAGAGAAAAAAAGAAAAAAATATCAACAGAGATATAACC
TCCAGGAAAGATTTGCCCTCAAGAACCTCAAATGTAGAGAGAAAAGCATCTCAGCAACAATGGGGTCGGG
GCAACTTTACAGAAGGAAAAGTTCCTCACATAAGGATTGAGAATGGAGCTGCTATTGAGGAAATCTATAC
CTTTGGAAGAATATTGGGAAAAGGGAGCTTTGGAATAGTCATTGAAGCGACAGACAAGGAAACAGAAACG
AAGTGGGCAATTAAAAAAGTGAACAAAGAAAAGGCTGGAAGCTCTGCTGTGAAGTTACTTGAACGAGAGG
TGAACATTCTGAAAAGTGTAAAACATGAACACATCATACATCTGGAACAAGTATTTGAAACGCCAAAGAA
AATGTACCTTGTGATGGAGCTTTGTGAGGATGGAGAACTCAAAGAAATTCTGGATAGGAAAGGGCATTTC
TCAGAGAATGAGACAAGGTGGATCATTCAAAGTCTCGCATCAGCTATAGCATATCTTCACAATAATGATA
TTGTACATAGAGATCTGAAACTGGAAAATATAATGGTTAAAAGCAGTCTTATTGATGATAACAATGAAAT
AAACTTAAACATAAAGGTGACTGATTTTGGCTTAGCGGTGAAGAAGCAAAGTAGGAGTGAAGCCATGCTG
CAGGCCACATGTGGGACTCCTATCTATATGGCCCCTGAAGTTATCAGTGCCCACGACTATAGCCAGCAGT
GTGACATTTGGAGCATAGGCGTCGTAATGTACATGTTATTACGTGGAGAACCACCCTTTTTGGCAAGCTC
AGAAGAGAAGCTTTTTGAGTTAATAAGAAAAGGAGAACTACATTTTGAAAATGCAGTCTGGAATTCCATA
AGTGACTGTGCTAAAAGTGTTTTGAAACAACTTATGAAAGTAGATCCTGCTCACAGAATCACAGCTAAGG
AACTACTAGATAACCAGTGGTTAACAGGCAATAAACTTTCTTCGGTGAGACCAACCAATGTATTAGAGAT
GATGAAGGAATGGAAAAATAACCCAGAAAGTGTTGAGGAAAACACAACAGAAGAGAAGAATAAGCCGTCC
ACTGAAGAAAAGTTGAAAAGTTACCAACCCTGGGGAAATGTCCCTGATGCCAATTACACTTCAGATGAAG
AGGAGGAAAAACAGTCTACTGCTTATGAAAAGCAATTTCCTGCAACCAGTAAGGACAACTTTGATATGTG
CAGTTCAAGTTTCACATCTAGCAAACTCCTTCCAGCTGAAATCAAGGGAGAAATGGAGAAAACCCCTGTG
ACTCCAAGCCAAGGAACAGCAACCAAGTACCCTGCTAAATCCGGCGCCCTGTCCAGAACCAAAAAGAAAC
TCTAA

Translation (514 aa):
MADSGLDKKSTKCPDCSSASQKDVLCVCSSKTRVPPVLVVEMSQTSSIGSAESLISLERKKEKNINRDIT
SRKDLPSRTSNVERKASQQQWGRGNFTEGKVPHIRIENGAAIEEIYTFGRILGKGSFGIVIEATDKETET
KWAIKKVNKEKAGSSAVKLLEREVNILKSVKHEHIIHLEQVFETPKKMYLVMELCEDGELKEILDRKGHF
SENETRWIIQSLASAIAYLHNNDIVHRDLKLENIMVKSSLIDDNNEINLNIKVTDFGLAVKKQSRSEAML
QATCGTPIYMAPEVISAHDYSQQCDIWSIGVVMYMLLRGEPPFLASSEEKLFELIRKGELHFENAVWNSI
SDCAKSVLKQLMKVDPAHRITAKELLDNQWLTGNKLSSVRPTNVLEMMKEWKNNPESVEENTTEEKNKPS
TEEKLKSYQPWGNVPDANYTSDEEEEKQSTAYEKQFPATSKDNFDMCSSSFTSSKLLPAEIKGEMEKTPV
TPSQGTATKYPAKSGALSRTKKKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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