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Report for CCDS8022.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8022.1 Public Homo sapiens 11 MTA2 24 110 108 CCDS HistoryNCBI Gene:9219Re-query CCDS DB by CCDS ID:8022.1Re-query CCDS DB by GeneID:9219See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8022.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000278823.7 ENSP00000278823.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000278823.7Link to Ensembl Protein Viewer:ENSP00000278823.2Re-query CCDS DB by Nucleotide ID:ENST00000278823Re-query CCDS DB by Protein ID:ENSP00000278823
Original member Current member NCBI NM_004739.4 NP_004730.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004739.4Link to Protein Sequence:NP_004730.2Re-query CCDS DB by Nucleotide ID:NM_004739Re-query CCDS DB by Protein ID:NP_004730Link to BLAST:NP_004730.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004730.2 668 O94776-1 668 100% 0 0

Chromosomal Locations for CCDS 8022.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 62593875 62594040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62594259 62594407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62594516 62594634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62594981 62595070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62595264 62595492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62595752 62595891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62596010 62596107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62596279 62596337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62596458 62596532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62596637 62596825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62597316 62597415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62597610 62597712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62598024 62598141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62598327 62598390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62598522 62598639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62600166 62600259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62600622 62600689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62601423 62601450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2007 nt):
ATGGCGGCCAACATGTACCGGGTGGGAGATTACGTCTATTTTGAGAACTCTTCCAGCAATCCTTACCTGG
TTAGACGGATTGAGGAGCTCAACAAGACTGCAAATGGAAATGTGGAGGCAAAGGTTGTCTGTCTTTTCCG
GCGCAGGGACATTTCTAGTAGCCTCAACAGCCTGGCTGATAGTAATGCCAGGGAGTTTGAAGAGGAATCA
AAGCAGCCAGGGGTGTCTGAGCAGCAGCGCCATCAACTGAAGCACCGGGAACTTTTTCTTTCTCGGCAAT
TTGAATCATTACCAGCCACCCACATACGGGGGAAATGCAGTGTGACCCTCTTGAATGAGACAGATATCTT
GAGCCAGTACCTGGAAAAGGAGGACTGCTTTTTTTACTCACTGGTGTTTGACCCCGTGCAGAAGACACTT
CTCGCTGATCAGGGCGAGATTAGAGTTGGTTGCAAATACCAAGCTGAGATCCCAGATCGCCTAGTAGAGG
GAGAATCTGATAATCGGAACCAGCAGAAGATGGAGATGAAGGTCTGGGACCCAGACAACCCTCTCACAGA
CCGGCAGATCGACCAGTTTCTTGTGGTGGCCCGAGCTGTGGGAACCTTTGCAAGAGCCCTAGATTGTAGC
AGCTCCATTCGGCAGCCAAGCTTGCACATGAGTGCAGCTGCTGCCTCCCGAGATATCACTCTGTTTCACG
CCATGGATACCTTGCAAAGGAACGGCTACGACCTGGCTAAGGCCATGTCGACCCTGGTACCCCAGGGAGG
CCCGGTGCTGTGTCGGGATGAGATGGAGGAATGGTCAGCCTCAGAGGCCATGCTATTTGAGGAGGCCCTA
GAGAAGTATGGGAAGGACTTCAATGATATTCGCCAGGATTTTCTACCCTGGAAGTCACTTGCCAGCATAG
TCCAGTTTTATTACATGTGGAAAACCACAGACCGGTATATTCAGCAGAAAAGGTTGAAAGCTGCTGAAGC
AGACAGCAAACTGAAACAGGTCTACATTCCCACCTACACTAAGCCAAACCCTAACCAGATCATTTCTGTG
GGTTCAAAACCTGGCATGAATGGGGCTGGATTTCAGAAGGGCCTGACTTGTGAGAGTTGCCACACCACAC
AGTCTGCTCAGTGGTATGCCTGGGGCCCACCTAACATGCAGTGCCGCCTCTGTGCTTCCTGTTGGATCTA
CTGGAAGAAGTATGGGGGACTGAAGACCCCAACTCAGCTTGAGGGGGCCACTCGGGGCACCACGGAGCCA
CACTCAAGGGGTCATTTATCCAGACCTGAAGCTCAAAGTCTCTCTCCTTACACAACCAGCGCCAACAGGG
CCAAGCTACTGGCTAAGAACAGACAAACTTTCCTGCTTCAGACCACAAAGCTGACCCGTCTTGCCAGACG
CATGTGCAGGGACCTATTACAGCCAAGGAGGGCCGCCCGACGGCCTTATGCTCCTATCAATGCCAATGCC
ATCAAAGCAGAGTGCTCCATTCGACTTCCTAAGGCCGCCAAGACTCCATTGAAGATTCACCCTCTGGTGC
GGCTGCCCCTGGCAACTATCGTCAAAGATCTGGTGGCCCAGGCACCCCTGAAACCAAAAACACCTCGGGG
TACCAAGACACCGATCAACAGAAACCAGCTGTCCCAGAACCGGGGACTGGGGGGCATTATGGTGAAACGG
GCCTATGAGACTATGGCAGGGGCAGGGGTTCCTTTCTCTGCCAATGGAAGGCCTCTGGCTTCAGGGATTC
GTTCAAGCTCACAGCCAGCAGCCAAGCGTCAGAAACTAAACCCAGCTGATGCCCCCAATCCTGTGGTGTT
TGTGGCCACAAAGGATACCAGGGCCCTACGGAAGGCTCTGACCCATCTGGAAATGCGGCGAGCTGCTCGC
CGACCCAACTTGCCCCTGAAGGTGAAGCCAACGCTGATTGCAGTGCGGCCCCCTGTCCCTCTACCTGCAC
CCTCACATCCTGCCAGCACCAATGAGCCTATTGTCCTGGAGGACTGA

Translation (668 aa):
MAANMYRVGDYVYFENSSSNPYLVRRIEELNKTANGNVEAKVVCLFRRRDISSSLNSLADSNAREFEEES
KQPGVSEQQRHQLKHRELFLSRQFESLPATHIRGKCSVTLLNETDILSQYLEKEDCFFYSLVFDPVQKTL
LADQGEIRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTFARALDCS
SSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRDEMEEWSASEAMLFEEAL
EKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRYIQQKRLKAAEADSKLKQVYIPTYTKPNPNQIISV
GSKPGMNGAGFQKGLTCESCHTTQSAQWYAWGPPNMQCRLCASCWIYWKKYGGLKTPTQLEGATRGTTEP
HSRGHLSRPEAQSLSPYTTSANRAKLLAKNRQTFLLQTTKLTRLARRMCRDLLQPRRAARRPYAPINANA
IKAECSIRLPKAAKTPLKIHPLVRLPLATIVKDLVAQAPLKPKTPRGTKTPINRNQLSQNRGLGGIMVKR
AYETMAGAGVPFSANGRPLASGIRSSSQPAAKRQKLNPADAPNPVVFVATKDTRALRKALTHLEMRRAAR
RPNLPLKVKPTLIAVRPPVPLPAPSHPASTNEPIVLED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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