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Report for CCDS8061.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8061.1 Public Homo sapiens 11 NUDT22 24 110 108 CCDS HistoryNCBI Gene:84304Re-query CCDS DB by CCDS ID:8061.1Re-query CCDS DB by GeneID:84304See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 8061.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000279206.8 ENSP00000279206.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000279206.8Link to Ensembl Protein Viewer:ENSP00000279206.3Re-query CCDS DB by Nucleotide ID:ENST00000279206Re-query CCDS DB by Protein ID:ENSP00000279206
Original member Current member NCBI NM_001128612.3 NP_001122084.2 Accepted alive Link to Nucleotide Sequence:NM_001128612.3Link to Protein Sequence:NP_001122084.2Re-query CCDS DB by Nucleotide ID:NM_001128612Re-query CCDS DB by Protein ID:NP_001122084Link to BLAST:NP_001122084.2
Original member Current member NCBI NM_032344.4 NP_115720.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032344.4Link to Protein Sequence:NP_115720.2Re-query CCDS DB by Nucleotide ID:NM_032344Re-query CCDS DB by Protein ID:NP_115720Link to BLAST:NP_115720.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001122084.2 303 Q9BRQ3-1 303 100% 0 0
NP_115720.2 303 Q9BRQ3-1 303 100% 0 0

Chromosomal Locations for CCDS 8061.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 64226653 64227132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64227568 64227666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64229247 64229344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64229478 64229571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64229850 64229990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (912 nt):
ATGGATCCTGAGGTGACCTTGCTGCTGCAGTGCCCTGGCGGGGGCCTGCCCCAGGAGCAGATACAGGCCG
AGCTGAGCCCCGCCCATGACCGTCGCCCACTGCCAGGTGGGGACGAGGCCATCACTGCCATCTGGGAGAC
CCGGCTAAAGGCCCAACCCTGGCTCTTCGACGCCCCCAAGTTCCGCCTGCACTCAGCCACCCTGGCGCCT
ATTGGCTCTCGGGGGCCACAGCTGCTCCTGCGCCTGGGCCTTACTTCCTACCGAGACTTCCTGGGCACCA
ACTGGTCCAGCTCAGCTGCCTGGCTGCGACAGCAGGGTGCCACCGACTGGGGTGACACGCAGGCCTATCT
GGCGGACCCACTGGGGGTGGGCGCTGCACTAGCCACAGCCGATGACTTCCTTGTCTTCCTGCGCCGCTCC
CGGCAGGTGGCTGAGGCCCCTGGGCTGGTGGACGTACCTGGTGGGCACCCTGAGCCTCAGGCCCTGTGCC
CTGGTGGCAGCCCCCAGCACCAGGACCTCGCTGGGCAGCTGGTGGTACATGAACTCTTTTCCAGTGTCCT
TCAGGAGATCTGTGATGAGGTGAACCTGCCGCTGCTCACCCTGAGCCAGCCCCTGCTGTTGGGCATCGCC
CGAAATGAGACCAGTGCTGGCCGAGCCAGTGCCGAGTTCTATGTCCAGTGCAGCCTGACTTCTGAGCAGG
TGAGGAAGCACTACCTGAGTGGGGGACCCGAGGCCCACGAGTCTACAGGAATCTTCTTTGTGGAGACACA
GAACGTGCAGAGATTGCTCGAGACGGAGATGTGGGCTGAACTCTGCCCCTCGGCCAAAGGCGCCATCATC
CTCTACAACCGGGTTCAGGGAAGTCCCACTGGAGCGGCCCTAGGGTCCCCAGCCCTACTCCCGCCGCTCT
GA

Translation (303 aa):
MDPEVTLLLQCPGGGLPQEQIQAELSPAHDRRPLPGGDEAITAIWETRLKAQPWLFDAPKFRLHSATLAP
IGSRGPQLLLRLGLTSYRDFLGTNWSSSAAWLRQQGATDWGDTQAYLADPLGVGAALATADDFLVFLRRS
RQVAEAPGLVDVPGGHPEPQALCPGGSPQHQDLAGQLVVHELFSSVLQEICDEVNLPLLTLSQPLLLGIA
RNETSAGRASAEFYVQCSLTSEQVRKHYLSGGPEAHESTGIFFVETQNVQRLLETEMWAELCPSAKGAII
LYNRVQGSPTGAALGSPALLPPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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