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Report for CCDS8112.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8112.1 Public Homo sapiens 11 OVOL1 24 110 108 CCDS HistoryNCBI Gene:5017Re-query CCDS DB by CCDS ID:8112.1Re-query CCDS DB by GeneID:5017See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8112.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335987.8 ENSP00000337862.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000335987.8Link to Ensembl Protein Viewer:ENSP00000337862.3Re-query CCDS DB by Nucleotide ID:ENST00000335987Re-query CCDS DB by Protein ID:ENSP00000337862
Original member Current member NCBI NM_004561.4 NP_004552.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004561.4Link to Protein Sequence:NP_004552.2Re-query CCDS DB by Nucleotide ID:NM_004561Re-query CCDS DB by Protein ID:NP_004552Link to BLAST:NP_004552.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004552.2 267 O14753 267 100% 0 0

Chromosomal Locations for CCDS 8112.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 65787374 65787473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65794031 65794248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65794538 65794727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65795046 65795341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (804 nt):
ATGCCCCGCGCGTTCCTGGTGAAGAAGCCGTGCGTCTCCACGTGCAAGAGGAACTGGAGCGAGCTCCCCG
ACGAGGAGCGCGGCGAGATCTACGTGCCAGTCAGCCTGGGCTTCTGCCCACCACAGCCCTACCGGGAGCC
GGAACCCTCTGTGGCCGAACCCCCTTCCTGCCCGCTGGCTTTGAACATGAGCCTTCGAGACTCTAGCTAC
AGCATGGCCCCCGGGCCCTGTGTGGTGGCCCAGCTGCCCTCTGAAGACATGGGCCACTTGACAGACCCCC
AGAGCAGAGACCATGGCTTCCTGCGCACCAAGATGAAGGTGACCCTTGGGGACAGTCCCAGTGGAGACCT
GTTCACCTGCCGTGTCTGCCAGAAGGCCTTCACCTACCAGCGCATGCTGAACCGCCACATGAAGTGTCAC
AACGACGTCAAGAGGCACCTCTGCACGTACTGCGGGAAGGGCTTCAATGACACCTTCGACCTCAAGAGAC
ACGTCCGAACTCACACTGGCGTGCGGCCCTACAAGTGCAGCCTGTGTGACAAGGCCTTCACGCAGCGCTG
CTCTCTGGAGTCTCACCTCAAGAAGATCCATGGTGTGCAGCAGAAGTACGCGTACAAGGAGCGGCGGGCC
AAGCTGTACGTGTGTGAGGAGTGCGGCTGCACATCTGAGAGCCAGGAGGGCCACGTCCTGCACCTGAAGG
AGCACCACCCTGACAGCCCGCTGCTGCGCAAGACCTCCAAGAAGGTGGCCGTGGCACTACAGAACACTGT
CACTTCCCTGCTGCAGGGCAGCCCCCACCTGTGA

Translation (267 aa):
MPRAFLVKKPCVSTCKRNWSELPDEERGEIYVPVSLGFCPPQPYREPEPSVAEPPSCPLALNMSLRDSSY
SMAPGPCVVAQLPSEDMGHLTDPQSRDHGFLRTKMKVTLGDSPSGDLFTCRVCQKAFTYQRMLNRHMKCH
NDVKRHLCTYCGKGFNDTFDLKRHVRTHTGVRPYKCSLCDKAFTQRCSLESHLKKIHGVQQKYAYKERRA
KLYVCEECGCTSESQEGHVLHLKEHHPDSPLLRKTSKKVAVALQNTVTSLLQGSPHL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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