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Report for CCDS81261.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81261.1 Public Homo sapiens 1 FBXO44 24 110 108 CCDS HistoryNCBI Gene:93611Re-query CCDS DB by CCDS ID:81261.1Re-query CCDS DB by GeneID:93611See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81261.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376768.5 ENSP00000365959.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000376768.5Link to Ensembl Protein Viewer:ENSP00000365959.1Re-query CCDS DB by Nucleotide ID:ENST00000376768Re-query CCDS DB by Protein ID:ENSP00000365959
Original member Current member NCBI NM_001330355.2 NP_001317284.1 Accepted alive Link to Nucleotide Sequence:NM_001330355.2Link to Protein Sequence:NP_001317284.1Re-query CCDS DB by Nucleotide ID:NM_001330355Re-query CCDS DB by Protein ID:NP_001317284Link to BLAST:NP_001317284.1

Chromosomal Locations for CCDS 81261.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 11655836 11656100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11658267 11658364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11658533 11658628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11658736 11658871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11661130 11661305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (771 nt):
ATGGCTGTGGGGAACATCAACGAGCTGCCCGAGAACATCCTGCTGGAGCTGTTCACGCACGTGCCCGCCC
GCCAGCTGCTGCTGAACTGCCGCCTGGTCTGCAGCCTCTGGCGGGACCTCATCGACCTCGTGACCCTCTG
GAAACGCAAGTGCCTGCGAGAGGGCTTCATCACTGAGGACTGGGACCAGCCCGTGGCCGACTGGAAGATC
TTCTACTTCTTACGGAGCCTGCACAGGAACCTCCTGCACAACCCGTGCGCTGAAGAGGGGTTCGAGTTCT
GGAGCCTGGATGTGAATGGAGGCGATGAGTGGAAGGTGGAGGATCTCTCTCGAGACCAGAGGAAGGAATT
CCCCAATGACCAGCACCTGCCTCAAGTCCCAGGTGGTGGACCTCAAGGCCGAAGGGTATTGGGAGGAGCT
GATGGATACCACACGGCCGGACATCGAGGTCAAGGACTGGTTCGCAGCCAGGCCAGATTGCGGGTCCAAG
TACCAGCTGTGCGTTCAGCTCCTGTCGTCCGCGCACGCGCCTCTGGGGACCTTCCAGCCAGACCCGGCGA
CCATCCAGCAGAAGAGCGATGCCAAGTGGAGGGAGGTCTCCCACACATTCTCCAACTACCCGCCCGGCGT
CCGCTACATCTGGTTTCAGCACGGCGGCGTGGACACTCATTACTGGGCCGGCTGGTACGGCCCGAGGGTC
ACCAACAGCAGCATCACCATCGGGCCCCCGCTGCCCTGACACCCCCTGAGCCCCCATCTGCTGAACCCTG
A

Translation (256 aa):
MAVGNINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLWKRKCLREGFITEDWDQPVADWKI
FYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVEDLSRDQRKEFPNDQHLPQVPGGGPQGRRVLGGA
DGYHTAGHRGQGLVRSQARLRVQVPAVRSAPVVRARASGDLPARPGDHPAEERCQVEGGLPHILQLPARR
PLHLVSARRRGHSLLGRLVRPEGHQQQHHHRAPAALTPPEPPSAEP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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