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Report for CCDS81460.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81460.1 Public Homo sapiens 10 FRMPD2 24 110 108 CCDS HistoryNCBI Gene:143162Re-query CCDS DB by CCDS ID:81460.1Re-query CCDS DB by GeneID:143162See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81460.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000305531.3 ENSP00000307079.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000305531.3Link to Ensembl Protein Viewer:ENSP00000307079.3Re-query CCDS DB by Nucleotide ID:ENST00000305531Re-query CCDS DB by Protein ID:ENSP00000307079
Original member Current member NCBI NM_001318191.1 NP_001305120.1 Accepted alive Link to Nucleotide Sequence:NM_001318191.1Link to Protein Sequence:NP_001305120.1Re-query CCDS DB by Nucleotide ID:NM_001318191Re-query CCDS DB by Protein ID:NP_001305120Link to BLAST:NP_001305120.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001305120.1 1284 Q68DX3-2 1284 99.9221% 0 1

Chromosomal Locations for CCDS 81460.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 48157322 48157370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48163328 48163671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48168595 48168693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48170994 48171208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48172946 48173093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48174870 48174955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48175846 48175939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48178047 48178151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48180803 48181008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48184566 48184682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48184774 48184881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48185553 48185645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48187192 48187292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48192684 48192894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48201228 48201384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48206748 48206933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48211954 48212106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48222313 48222451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48223123 48223270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48232115 48232289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48236482 48236553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48237991 48238123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48239605 48239692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48240360 48240492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48242161 48242352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48249021 48249178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 48251566 48251710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3855 nt):
ATGCATGTCTTTATTGTAGGCATGAGCCTGTCCTCTGTGACGCTGGCCAGCGCCCTACAGGTCAGGGGTG
AAGCTCTGTCTGAGGAGGAAATCTGGTCCCTCCTGTTCCTGGCCGCTGAGCAGCTCCTGGAAGACCTCCG
CAACGATTCCTCGGACTATGTGGTTTGCCCCTGGTCAGCCCTGCTTTCTGCAGCTGGAAGCCTTTCTTTC
CAAGGCCGTGTTTCTCATATAGAGGCTGCTCCTTTCAAGGCCCCTGAACTGCTACAGGGACAGAGTGAGG
ATGAGCAGCCTGATGCATCTCAGCCCCTGCAGCTCTGCGAGCCCCTGCACTCCATCCTGCTGACCATGTG
TGAAGACCAGCCTCACAGGCGGTGCACGTTGCAGTCGGTTCTGGAAGCTTGTCGGGTTCATGAGAAAGAA
GTGTCTGTCTACCCAGCCCCTGCTGGTCTCCACATCAGAAGGCTGGTTGGCTTGGTTCTGGGTACCATTT
CTGAGGTGGAGAAAAGAGTTGTGGAGGAAAGCTCCTCTGTGCAGCAGAACAGAAGCTACCTGCTCAGGAA
GAGGCTGCGTGGGACAAGCAGCGAGAGCCCAGCGGCACAGGCCCCGGAGTGTCTGCATCCTTGCAGAGTT
TCAGAAAGAAGCACGGAGACCCAGAGCTCACCAGAGCCCCATTGGAGCACCTTGACACACAGTCACTGCA
GCCTCCTTGTTAACCGCGCTCTTCCAGGAGCAGATCCCCAGGACCAGCAGGCGGGCCGGAGGCTCAGCTC
TGGATCTGTGCACTCGGCAGCAGACAGCTCATGGCCAACAACTCCTTCTCAGAGGGGTTTTCTGCAAAGA
AGGAGCAAGTTTTCCAGGCCAGAGTTCATCCTGTTGGCTGGAGAGGCCCCGATGACACTACATCTGCCGG
GATCGGTTGTGACCAAAAAAGGGAAATCCTATTTGGCTCTCAGGGACCTCTGTGTGGTCCTGCTGAACGG
GCAGCACCTGGAGGTAAAATGTGATGTTGAATCAACAGTGGGAGCTGTCTTCAATGCCGTGACATCCTTT
GCCAACCTCGAGGAACTCACCTACTTTGGCTTGGCGTATATGAAAAGCAAAGAGTTCTTTTTCCTGGACA
GTGAAACCAGATTGTGCAAAATAGCTCCTGAAGGCTGGAGAGAGCAGCCTCAGAAGACCTCCATGAATAC
CTTCACACTCTTCCTGAGGATAAAGTTCTTTGTCAGCCACTATGGGCTGCTCCAGCACAGCCTGACAAGG
CACCAGTTTTACCTGCAGCTTCGGAAAGATATCCTGGAGGAGAGGCTGTACTGCAATGAAGAGATACTGC
TGCAGCTGGGGGTCCTTGCCTTGCAGGCTGAGTTTGGCAATTACCCTAAGGAGGTGGAGAGTAAGCCATA
CTTTCACGTTGAAGATTACATCCCAGCGAGTCTGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAA
GTCTCAGAGATGCACCGGCTCAGCTCTGCACTGTGGGGAGAGGATGCTGAGCTGAAGTTCTTGAGGGTCA
CTCAGCAGCTCCCAGAATACGGTGTGCTGGTTCACCAAGTATTCTCAGAGAAGAGGAGGCCAGAAGAGGA
GATGGCCCTGGGGATCTGTGCCAAGGGTGTCATAGTCTATGAAGTGAAAAACAACAGCAGAATTGCAATG
TTACGGTTTCAGTGGAGAGAAACCGGGAAGATTTCTACTTATCAAAAAAAGTTCACCATCACAAGCAGTG
TCACTGGGAAGAAGCACACATTTGTCACAGATTCAGCCAAGACCAGTAAATACTTACTGGACCTCTGCTC
AGCCCAGCATGGGTTTAATGCACAGATGGGCTCTGGGCAGCCTTCCCATGTTTTATTTGACCATGATAAG
TTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGGTCTAAGCCTCTCATTTGGATTCAGAGAT
TGTCATGCTCAGAAAACGAGTTGTTTGTATCCAGGCTTCAGGGTGCTGCAGGAGGCCTGCTGAGTACATC
AATGGATAACTTCAACGTGGACGGCAGCAAGGAGGCTGGAGCAGAAGGCATCGGGCGCAGCCCCTGCACT
GGCCGGGAGCAGCTGAAGAGTGCCTGTGTGATCCAGAAGCCAATGACCTGGGACTCTCTCTCTGGACCAC
CTGTTCAGAGCATGCATGCAGGCTCAAAGAATAATAGGAGGAAGAGCTTTATAGCTGAACCGGGCCGAGA
AATTGTACGTGTGACACTGAAACGTGACCCACATCGTGGTTTTGGGTTTGTCATTAATGAGGGAGAGTAT
TCAGGCCAAGCTGACCCTGGCATTTTTATATCTTCTATTATACCTGGAGGACCAGCAGAAAAAGCAAAAA
CGATCAAACCAGGAGGGCAGATACTAGCCCTGAATCACATCAGTCTGGAGGGCTTCACATTCAACATGGC
TGTTAGGATGATCCAGAATTCCCCTGACAACATAGAATTAATTATTTCTCAGTCAAAAGGTGTTGGTGGA
AATAACCCAGATGAAGAAAAGAATAGCACAGCCAATTCTGGGGTCTCCTCTACAGACATCCTGAGCTTCG
GGTACCAGGGAAGTTTGTTGTCACACACACAAGACCAGGACAGAAATACTGAAGAACTAGACATGGCTGG
GGTGCAGAGCTTAGTGCCCAGGCTGAGACATCAGCTTTCCTTTCTGCCGTTAAAGGGTGCTGGTTCTTCT
TGTCCTCCATCACCTCCAGAAATCAGTGCTGGTGAAATCTACTTTGTGGAACTGGTTAAAGAAGATGGGA
CACTTGGATTCAGTGTAACTGGTGGCATTAACACCAGTGTGCCATATGGTGGTATCTATGTGAAATCCAT
TGTTCCTGGAGGACCAGCTGCCAAGGAAGGGCAGATCCTACAGGGTGACCGACTCCTGCAGGTGGATGGA
GTGATTCTGTGCGGCCTCACCCACAAGCAGGCTGTGCAGTGCCTGACGGGTCCTGGGCAGGTTGCAAGAC
TGGTCTTAGAGAGAAGAGTCCCCAGGAGTACACAGCAGTGTCCTTCTGCTAATGACAGCATGGGAGATGA
ACGCACGGCTGTTTCCTTGGTAACAGCCTTGCCTGGCAGGCCTTCGAGCTGTGTCTCAGTGACAGATGGT
CCTAAGTTTGAAGTCAAACTAAAAAAGAATGCCAATGGTTTGGGATTCAGTTTCGTGCAGATGGAGAAAG
AGAGCTGCAGCCATCTCAAAAGTGATCTTGTGAGGATTAAGAGGCTCTTTCCGGGGCAGCCAGCTGAGGA
GAATGGGGCCATTGCAGCTGGTGACATTATCCTGGCCGTGAATGGAAGGTCCACGGAAGGCCTCATCTTC
CAGGAGGTGCTGCATTTACTGAGAGGGGCCCCACAGGAAGTCACGCTCCTCCTTTGCCGACCCCCTCCAG
GTGCGCTGCCTGAGCTGGAGCAGGAATGGCAGACACCTGAACTCTCAGCTGACAAAGAATTCACCAGGGC
AACATGTACTGACTCATGTACCAGCCCCATCCTGGATCAAGAGGACAGCTGGAGGGACAGTGCCTCCCCA
GATGCAGGGGAAGGCCTGGGTCTCAGGCCAGAGTCTTCCCAAAAGGCCATCAGAGAGGCACAATGGGGCC
AAAACAGAGAGAGACCTTGGGCCAGTTCCTTGACACATTCTCCTGAGTCCCACCCTCATTTATGCAAACT
TCACCAAGAAAGGGATGAATCAACATTGGCGACCTCTTTGGAAAAGGATGTGAGGCAAAACTGCTATTCA
GTTTGTGATATCATGAGACTTGGAAGATATTCCTTCTCATCTCCTCTAACCAGACTTTCGACAGATATTT
TCTGA

Translation (1284 aa):
MHVFIVGMSLSSVTLASALQVRGEALSEEEIWSLLFLAAEQLLEDLRNDSSDYVVCPWSALLSAAGSLSF
QGRVSHIEAAPFKAPELLQGQSEDEQPDASQPLQLCEPLHSILLTMCEDQPHRRCTLQSVLEACRVHEKE
VSVYPAPAGLHIRRLVGLVLGTISEVEKRVVEESSSVQQNRSYLLRKRLRGTSSESPAAQAPECLHPCRV
SERSTETQSSPEPHWSTLTHSHCSLLVNRALPGADPQDQQAGRRLSSGSVHSAADSSWPTTPSQRGFLQR
RSKFSRPEFILLAGEAPMTLHLPGSVVTKKGKSYLALRDLCVVLLNGQHLEVKCDVESTVGAVFNAVTSF
ANLEELTYFGLAYMKSKEFFFLDSETRLCKIAPEGWREQPQKTSMNTFTLFLRIKFFVSHYGLLQHSLTR
HQFYLQLRKDILEERLYCNEEILLQLGVLALQAEFGNYPKEVESKPYFHVEDYIPASLIERMTALRVQVE
VSEMHRLSSALWGEDAELKFLRVTQQLPEYGVLVHQVFSEKRRPEEEMALGICAKGVIVYEVKNNSRIAM
LRFQWRETGKISTYQKKFTITSSVTGKKHTFVTDSAKTSKYLLDLCSAQHGFNAQMGSGQPSHVLFDHDK
FVQMANLSPAHQARSKPLIWIQRLSCSENELFVSRLQGAAGGLLSTSMDNFNVDGSKEAGAEGIGRSPCT
GREQLKSACVIQKPMTWDSLSGPPVQSMHAGSKNNRRKSFIAEPGREIVRVTLKRDPHRGFGFVINEGEY
SGQADPGIFISSIIPGGPAEKAKTIKPGGQILALNHISLEGFTFNMAVRMIQNSPDNIELIISQSKGVGG
NNPDEEKNSTANSGVSSTDILSFGYQGSLLSHTQDQDRNTEELDMAGVQSLVPRLRHQLSFLPLKGAGSS
CPPSPPEISAGEIYFVELVKEDGTLGFSVTGGINTSVPYGGIYVKSIVPGGPAAKEGQILQGDRLLQVDG
VILCGLTHKQAVQCLTGPGQVARLVLERRVPRSTQQCPSANDSMGDERTAVSLVTALPGRPSSCVSVTDG
PKFEVKLKKNANGLGFSFVQMEKESCSHLKSDLVRIKRLFPGQPAEENGAIAAGDIILAVNGRSTEGLIF
QEVLHLLRGAPQEVTLLLCRPPPGALPELEQEWQTPELSADKEFTRATCTDSCTSPILDQEDSWRDSASP
DAGEGLGLRPESSQKAIREAQWGQNRERPWASSLTHSPESHPHLCKLHQERDESTLATSLEKDVRQNCYS
VCDIMRLGRYSFSSPLTRLSTDIF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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