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Report for CCDS81460.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
81460.1 |
Public |
Homo sapiens |
10 |
FRMPD2 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:143162](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:81460.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:143162](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 10 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 81460.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000305531.3 |
ENSP00000307079.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000305531.3](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000307079.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000305531](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000307079](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001318191.1 |
NP_001305120.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001318191.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001305120.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001318191](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001305120](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001305120.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001305120.1 |
1284 |
Q68DX3-2 |
1284 |
99.9221% |
0 |
1 |
Chromosomal Locations for CCDS 81460.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3855 nt): ATGCATGTCTTTATTGTAGGCATGAGCCTGTCCTCTGTGACGCTGGCCAGCGCCCTACAGGTCAGGGGTG AAGCTCTGTCTGAGGAGGAAATCTGGTCCCTCCTGTTCCTGGCCGCTGAGCAGCTCCTGGAAGACCTCCG CAACGATTCCTCGGACTATGTGGTTTGCCCCTGGTCAGCCCTGCTTTCTGCAGCTGGAAGCCTTTCTTTC CAAGGCCGTGTTTCTCATATAGAGGCTGCTCCTTTCAAGGCCCCTGAACTGCTACAGGGACAGAGTGAGG ATGAGCAGCCTGATGCATCTCAGCCCCTGCAGCTCTGCGAGCCCCTGCACTCCATCCTGCTGACCATGTG TGAAGACCAGCCTCACAGGCGGTGCACGTTGCAGTCGGTTCTGGAAGCTTGTCGGGTTCATGAGAAAGAA GTGTCTGTCTACCCAGCCCCTGCTGGTCTCCACATCAGAAGGCTGGTTGGCTTGGTTCTGGGTACCATTT CTGAGGTGGAGAAAAGAGTTGTGGAGGAAAGCTCCTCTGTGCAGCAGAACAGAAGCTACCTGCTCAGGAA GAGGCTGCGTGGGACAAGCAGCGAGAGCCCAGCGGCACAGGCCCCGGAGTGTCTGCATCCTTGCAGAGTT TCAGAAAGAAGCACGGAGACCCAGAGCTCACCAGAGCCCCATTGGAGCACCTTGACACACAGTCACTGCA GCCTCCTTGTTAACCGCGCTCTTCCAGGAGCAGATCCCCAGGACCAGCAGGCGGGCCGGAGGCTCAGCTC TGGATCTGTGCACTCGGCAGCAGACAGCTCATGGCCAACAACTCCTTCTCAGAGGGGTTTTCTGCAAAGA AGGAGCAAGTTTTCCAGGCCAGAGTTCATCCTGTTGGCTGGAGAGGCCCCGATGACACTACATCTGCCGG GATCGGTTGTGACCAAAAAAGGGAAATCCTATTTGGCTCTCAGGGACCTCTGTGTGGTCCTGCTGAACGG GCAGCACCTGGAGGTAAAATGTGATGTTGAATCAACAGTGGGAGCTGTCTTCAATGCCGTGACATCCTTT GCCAACCTCGAGGAACTCACCTACTTTGGCTTGGCGTATATGAAAAGCAAAGAGTTCTTTTTCCTGGACA GTGAAACCAGATTGTGCAAAATAGCTCCTGAAGGCTGGAGAGAGCAGCCTCAGAAGACCTCCATGAATAC CTTCACACTCTTCCTGAGGATAAAGTTCTTTGTCAGCCACTATGGGCTGCTCCAGCACAGCCTGACAAGG CACCAGTTTTACCTGCAGCTTCGGAAAGATATCCTGGAGGAGAGGCTGTACTGCAATGAAGAGATACTGC TGCAGCTGGGGGTCCTTGCCTTGCAGGCTGAGTTTGGCAATTACCCTAAGGAGGTGGAGAGTAAGCCATA CTTTCACGTTGAAGATTACATCCCAGCGAGTCTGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAA GTCTCAGAGATGCACCGGCTCAGCTCTGCACTGTGGGGAGAGGATGCTGAGCTGAAGTTCTTGAGGGTCA CTCAGCAGCTCCCAGAATACGGTGTGCTGGTTCACCAAGTATTCTCAGAGAAGAGGAGGCCAGAAGAGGA GATGGCCCTGGGGATCTGTGCCAAGGGTGTCATAGTCTATGAAGTGAAAAACAACAGCAGAATTGCAATG TTACGGTTTCAGTGGAGAGAAACCGGGAAGATTTCTACTTATCAAAAAAAGTTCACCATCACAAGCAGTG TCACTGGGAAGAAGCACACATTTGTCACAGATTCAGCCAAGACCAGTAAATACTTACTGGACCTCTGCTC AGCCCAGCATGGGTTTAATGCACAGATGGGCTCTGGGCAGCCTTCCCATGTTTTATTTGACCATGATAAG TTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGGTCTAAGCCTCTCATTTGGATTCAGAGAT TGTCATGCTCAGAAAACGAGTTGTTTGTATCCAGGCTTCAGGGTGCTGCAGGAGGCCTGCTGAGTACATC AATGGATAACTTCAACGTGGACGGCAGCAAGGAGGCTGGAGCAGAAGGCATCGGGCGCAGCCCCTGCACT GGCCGGGAGCAGCTGAAGAGTGCCTGTGTGATCCAGAAGCCAATGACCTGGGACTCTCTCTCTGGACCAC CTGTTCAGAGCATGCATGCAGGCTCAAAGAATAATAGGAGGAAGAGCTTTATAGCTGAACCGGGCCGAGA AATTGTACGTGTGACACTGAAACGTGACCCACATCGTGGTTTTGGGTTTGTCATTAATGAGGGAGAGTAT TCAGGCCAAGCTGACCCTGGCATTTTTATATCTTCTATTATACCTGGAGGACCAGCAGAAAAAGCAAAAA CGATCAAACCAGGAGGGCAGATACTAGCCCTGAATCACATCAGTCTGGAGGGCTTCACATTCAACATGGC TGTTAGGATGATCCAGAATTCCCCTGACAACATAGAATTAATTATTTCTCAGTCAAAAGGTGTTGGTGGA AATAACCCAGATGAAGAAAAGAATAGCACAGCCAATTCTGGGGTCTCCTCTACAGACATCCTGAGCTTCG GGTACCAGGGAAGTTTGTTGTCACACACACAAGACCAGGACAGAAATACTGAAGAACTAGACATGGCTGG GGTGCAGAGCTTAGTGCCCAGGCTGAGACATCAGCTTTCCTTTCTGCCGTTAAAGGGTGCTGGTTCTTCT TGTCCTCCATCACCTCCAGAAATCAGTGCTGGTGAAATCTACTTTGTGGAACTGGTTAAAGAAGATGGGA CACTTGGATTCAGTGTAACTGGTGGCATTAACACCAGTGTGCCATATGGTGGTATCTATGTGAAATCCAT TGTTCCTGGAGGACCAGCTGCCAAGGAAGGGCAGATCCTACAGGGTGACCGACTCCTGCAGGTGGATGGA GTGATTCTGTGCGGCCTCACCCACAAGCAGGCTGTGCAGTGCCTGACGGGTCCTGGGCAGGTTGCAAGAC TGGTCTTAGAGAGAAGAGTCCCCAGGAGTACACAGCAGTGTCCTTCTGCTAATGACAGCATGGGAGATGA ACGCACGGCTGTTTCCTTGGTAACAGCCTTGCCTGGCAGGCCTTCGAGCTGTGTCTCAGTGACAGATGGT CCTAAGTTTGAAGTCAAACTAAAAAAGAATGCCAATGGTTTGGGATTCAGTTTCGTGCAGATGGAGAAAG AGAGCTGCAGCCATCTCAAAAGTGATCTTGTGAGGATTAAGAGGCTCTTTCCGGGGCAGCCAGCTGAGGA GAATGGGGCCATTGCAGCTGGTGACATTATCCTGGCCGTGAATGGAAGGTCCACGGAAGGCCTCATCTTC CAGGAGGTGCTGCATTTACTGAGAGGGGCCCCACAGGAAGTCACGCTCCTCCTTTGCCGACCCCCTCCAG GTGCGCTGCCTGAGCTGGAGCAGGAATGGCAGACACCTGAACTCTCAGCTGACAAAGAATTCACCAGGGC AACATGTACTGACTCATGTACCAGCCCCATCCTGGATCAAGAGGACAGCTGGAGGGACAGTGCCTCCCCA GATGCAGGGGAAGGCCTGGGTCTCAGGCCAGAGTCTTCCCAAAAGGCCATCAGAGAGGCACAATGGGGCC AAAACAGAGAGAGACCTTGGGCCAGTTCCTTGACACATTCTCCTGAGTCCCACCCTCATTTATGCAAACT TCACCAAGAAAGGGATGAATCAACATTGGCGACCTCTTTGGAAAAGGATGTGAGGCAAAACTGCTATTCA GTTTGTGATATCATGAGACTTGGAAGATATTCCTTCTCATCTCCTCTAACCAGACTTTCGACAGATATTT TCTGA
Translation (1284 aa): MHVFIVGMSLSSVTLASALQVRGEALSEEEIWSLLFLAAEQLLEDLRNDSSDYVVCPWSALLSAAGSLSF QGRVSHIEAAPFKAPELLQGQSEDEQPDASQPLQLCEPLHSILLTMCEDQPHRRCTLQSVLEACRVHEKE VSVYPAPAGLHIRRLVGLVLGTISEVEKRVVEESSSVQQNRSYLLRKRLRGTSSESPAAQAPECLHPCRV SERSTETQSSPEPHWSTLTHSHCSLLVNRALPGADPQDQQAGRRLSSGSVHSAADSSWPTTPSQRGFLQR RSKFSRPEFILLAGEAPMTLHLPGSVVTKKGKSYLALRDLCVVLLNGQHLEVKCDVESTVGAVFNAVTSF ANLEELTYFGLAYMKSKEFFFLDSETRLCKIAPEGWREQPQKTSMNTFTLFLRIKFFVSHYGLLQHSLTR HQFYLQLRKDILEERLYCNEEILLQLGVLALQAEFGNYPKEVESKPYFHVEDYIPASLIERMTALRVQVE VSEMHRLSSALWGEDAELKFLRVTQQLPEYGVLVHQVFSEKRRPEEEMALGICAKGVIVYEVKNNSRIAM LRFQWRETGKISTYQKKFTITSSVTGKKHTFVTDSAKTSKYLLDLCSAQHGFNAQMGSGQPSHVLFDHDK FVQMANLSPAHQARSKPLIWIQRLSCSENELFVSRLQGAAGGLLSTSMDNFNVDGSKEAGAEGIGRSPCT GREQLKSACVIQKPMTWDSLSGPPVQSMHAGSKNNRRKSFIAEPGREIVRVTLKRDPHRGFGFVINEGEY SGQADPGIFISSIIPGGPAEKAKTIKPGGQILALNHISLEGFTFNMAVRMIQNSPDNIELIISQSKGVGG NNPDEEKNSTANSGVSSTDILSFGYQGSLLSHTQDQDRNTEELDMAGVQSLVPRLRHQLSFLPLKGAGSS CPPSPPEISAGEIYFVELVKEDGTLGFSVTGGINTSVPYGGIYVKSIVPGGPAAKEGQILQGDRLLQVDG VILCGLTHKQAVQCLTGPGQVARLVLERRVPRSTQQCPSANDSMGDERTAVSLVTALPGRPSSCVSVTDG PKFEVKLKKNANGLGFSFVQMEKESCSHLKSDLVRIKRLFPGQPAEENGAIAAGDIILAVNGRSTEGLIF QEVLHLLRGAPQEVTLLLCRPPPGALPELEQEWQTPELSADKEFTRATCTDSCTSPILDQEDSWRDSASP DAGEGLGLRPESSQKAIREAQWGQNRERPWASSLTHSPESHPHLCKLHQERDESTLATSLEKDVRQNCYS VCDIMRLGRYSFSSPLTRLSTDIF
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