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Report for CCDS81465.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81465.1 Public Homo sapiens 10 ASAH2B 24 110 108 CCDS HistoryNCBI Gene:653308Re-query CCDS DB by CCDS ID:81465.1Re-query CCDS DB by GeneID:653308See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81465.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374007.5 ENSP00000363119.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000374007.5Link to Ensembl Protein Viewer:ENSP00000363119.1Re-query CCDS DB by Nucleotide ID:ENST00000374007Re-query CCDS DB by Protein ID:ENSP00000363119
Original member Current member EBI ENST00000647317.2 ENSP00000496089.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000647317.2Link to Ensembl Protein Viewer:ENSP00000496089.1Re-query CCDS DB by Nucleotide ID:ENST00000647317Re-query CCDS DB by Protein ID:ENSP00000496089
Original member Current member NCBI NM_001321958.2 NP_001308887.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001321958.2Link to Protein Sequence:NP_001308887.1Re-query CCDS DB by Nucleotide ID:NM_001321958Re-query CCDS DB by Protein ID:NP_001308887Link to BLAST:NP_001308887.1
Original member Current member NCBI NM_001321959.2 NP_001308888.1 Accepted alive Link to Nucleotide Sequence:NM_001321959.2Link to Protein Sequence:NP_001308888.1Re-query CCDS DB by Nucleotide ID:NM_001321959Re-query CCDS DB by Protein ID:NP_001308888Link to BLAST:NP_001308888.1
Original member Current member NCBI NM_001321960.2 NP_001308889.1 Accepted alive Link to Nucleotide Sequence:NM_001321960.2Link to Protein Sequence:NP_001308889.1Re-query CCDS DB by Nucleotide ID:NM_001321960Re-query CCDS DB by Protein ID:NP_001308889Link to BLAST:NP_001308889.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001308887.1 160 P0C7U1-2 160 100% 0 0
NP_001308888.1 160 P0C7U1-2 160 100% 0 0
NP_001308889.1 160 P0C7U1-2 160 100% 0 0

Chromosomal Locations for CCDS 81465.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 50745131 50745274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50749343 50749402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50752468 50752556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50754551 50754740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (483 nt):
ATGGTAGCCAACCTGAGCAGAGGTCCAGAACCTCCCTTTTTCAAACAATTAATAGTTCCATTAATTCCTA
GTATTGTGGATAGAGCACCAAAAGGCAGAACTTTCGGGGATGTCCTGCAGCCAGCAAAACCTGAATACAG
AGTGGGGGAAGTTGCTGAAGTTATATTTGTAGGTGCTAACCCGAAGAATTCAGTACAAAACCAGACCCAT
CAGACCTTCCTCACTGTGGAGAAATATGAGGCTACTTCAACATCGTGGCAGATAGTGTGTAATGATGCCT
CCTGGGAGACTCGTTTTTATTGGCACAAGGGACTCCTGGGTCTGAGTAATGCAACAGTGGAATGGCATAT
TCCAGACACTGCCCAGCCTGGAATCTACAGAATAAGATATTTTGGACACAATCGGAAGCAGGACATTCTG
AAGCCTGCTGTCATACTTTCATTTGAAGGCACTTCCCCGGCTTTTGAAGTTGTAACTATTTAG

Translation (160 aa):
MVANLSRGPEPPFFKQLIVPLIPSIVDRAPKGRTFGDVLQPAKPEYRVGEVAEVIFVGANPKNSVQNQTH
QTFLTVEKYEATSTSWQIVCNDASWETRFYWHKGLLGLSNATVEWHIPDTAQPGIYRIRYFGHNRKQDIL
KPAVILSFEGTSPAFEVVTI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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