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Report for CCDS81616.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81616.1 Public Homo sapiens 11 GPR83 24 110 108 CCDS HistoryNCBI Gene:10888Re-query CCDS DB by CCDS ID:81616.1Re-query CCDS DB by GeneID:10888See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81616.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000539203.2 ENSP00000441550.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000539203.2Link to Ensembl Protein Viewer:ENSP00000441550.1Re-query CCDS DB by Nucleotide ID:ENST00000539203Re-query CCDS DB by Protein ID:ENSP00000441550
Original member Current member NCBI NM_001330345.2 NP_001317274.1 Accepted alive Link to Nucleotide Sequence:NM_001330345.2Link to Protein Sequence:NP_001317274.1Re-query CCDS DB by Nucleotide ID:NM_001330345Re-query CCDS DB by Protein ID:NP_001317274Link to BLAST:NP_001317274.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317274.1 381 Q9NYM4-2 381 100% 0 0

Chromosomal Locations for CCDS 81616.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 94380149 94380773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 94393485 94393618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 94400861 94401247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1146 nt):
ATGGTCCCTCACCTCTTGCTGCTCTGTCTCCTCCCCTTGGTGCGAGCCACCGAGCCCCACGAGGGCCGGG
CCGACGAGCAGAGCGCGGAGGCGGCCCTGGCCGTGCCCAATGCCTCGCACTTCTTCTCTTGGAACAACTA
CACCTTCTCCGACTGGCAGAACTTTGTGGGCAGGAGGCGCTACGGCGCTGAGTCCCAGAACCCCACGGTG
AAAGCCCTGCTCATTGTGGCTTACTCCTTCATCATTGTCTTCTCACTCTTTGGCAACGTCCTGGTCTGTC
ATGTCATCTTCAAGAACCAGCGAATGCACTCGGCCACCAGCCTCTTCATCGTCAACCTGGCAGTTGCCGA
CATAATGATCACGCTGCTCAACACCCCCTTCACTTTGGTCATCATGCACCCCTTGAAACCCCGGATCTCA
ATCACAAAGGGTGTCATCTACATCGCTGTCATCTGGACCATGGCTACGTTCTTTTCACTCCCACATGCTA
TCTGCCAGAAATTATTTACCTTCAAATACAGTGAGGACATTGTGCGCTCCCTCTGCCTGCCAGACTTCCC
TGAGCCAGCTGACCTCTTCTGGAAGTACCTGGACTTGGCCACCTTCATCCTGCTCTACATCCTGCCCCTC
CTCATCATCTCTGTGGCCTACGCTCGTGTGGCCAAGAAACTGTGGCTGTGTAATATGATTGGCGATGTGA
CCACAGAGCAGTACTTTGCCCTGCGGCGCAAAAAGAAGAAGACCATCAAGATGTTGATGCTGGTGGTAGT
CCTCTTTGCCCTCTGCTGGTTCCCCCTCAACTGCTACGTCCTCCTCCTGTCCAGCAAGGTCATCCGCACC
AACAATGCCCTCTACTTTGCCTTCCACTGGTTTGCCATGAGCAGCACCTGCTATAACCCCTTCATATACT
GCTGGCTGAACGAGAACTTCAGGATTGAGCTAAAGGCATTACTGAGCATGTGTCAAAGACCTCCCAAGCC
TCAGGAGGACAGGCCACCCTCCCCAGTTCCTTCCTTCAGGGTGGCCTGGACAGAGAAGAATGATGGCCAG
AGGGCTCCCCTTGCCAATAACCTCCTGCCCACCTCCCAACTCCAGTCTGGGAAGACAGACCTGTCATCTG
TGGAACCCATTGTGACGATGAGTTAG

Translation (381 aa):
MVPHLLLLCLLPLVRATEPHEGRADEQSAEAALAVPNASHFFSWNNYTFSDWQNFVGRRRYGAESQNPTV
KALLIVAYSFIIVFSLFGNVLVCHVIFKNQRMHSATSLFIVNLAVADIMITLLNTPFTLVIMHPLKPRIS
ITKGVIYIAVIWTMATFFSLPHAICQKLFTFKYSEDIVRSLCLPDFPEPADLFWKYLDLATFILLYILPL
LIISVAYARVAKKLWLCNMIGDVTTEQYFALRRKKKKTIKMLMLVVVLFALCWFPLNCYVLLLSSKVIRT
NNALYFAFHWFAMSSTCYNPFIYCWLNENFRIELKALLSMCQRPPKPQEDRPPSPVPSFRVAWTEKNDGQ
RAPLANNLLPTSQLQSGKTDLSSVEPIVTMS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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