NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS81619.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81619.1 Public Homo sapiens 11 FAM76B 24 110 108 CCDS HistoryNCBI Gene:143684Re-query CCDS DB by CCDS ID:81619.1Re-query CCDS DB by GeneID:143684See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81619.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000536839.1 ENSP00000441168.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000536839.1Link to Ensembl Protein Viewer:ENSP00000441168.1Re-query CCDS DB by Nucleotide ID:ENST00000536839Re-query CCDS DB by Protein ID:ENSP00000441168
Original member Current member NCBI NM_001330357.2 NP_001317286.1 Accepted alive Link to Nucleotide Sequence:NM_001330357.2Link to Protein Sequence:NP_001317286.1Re-query CCDS DB by Nucleotide ID:NM_001330357Re-query CCDS DB by Protein ID:NP_001317286Link to BLAST:NP_001317286.1

Chromosomal Locations for CCDS 81619.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 95771561 95771650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 95775922 95776023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 95778822 95778954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 95779607 95779687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 95779879 95779926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 95783065 95783264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 95786119 95786274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 95787624 95787678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 95788499 95788563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 95789392 95789478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1017 nt):
ATGGCGGCCTCGGCCCTGTACGCCTGCACCAAGTGTACCCAGCGTTATCCTTTCGAGGAGCTCTCCCAGG
GCCAGCAGCTCTGCAAGGAATGTCGGATTGCACATCCTATTGTAAAATGTACTTACTGCAGATCAGAATT
TCAACAAGAGAGCAAAACTAACACAATTTGTAAGAAGTGTGCTCAAAATGTGAAGCAATTTGGGACGCCC
AAGCCTTGTCAGTACTGTAACATAATTGCAGCATTTATTGGTACCAAGTGTCAGCGTTGCACAAATTCAG
AAAAAAAGTATGGACCACCTCAGACCTGTGAACAGTGCAAACAGCAATGTGCTTTTGATCGGAAGGAGGA
AGGAAGAAGAAAGGTTGATGGAAAGTTATTATGCTGGCTCTGTACTTTATCGTACAAAAGAGTTTTACAG
AAGACGAAAGAACAAAGGAAGAGCCTGGGATCTTCACATTCAAATTCATCTTCTTCATCTCTTACTGAGA
AAGACCAGCATCATCCAAAACATCATCACCACCATCATCACCATCACCATCGTCACAGCAGTAGCCATCA
CAAAATCAGCAATCTAAGTCCAGAAGAAGAGCAGGGACTGTGGAAACAGAGCCATAAATCCTCTGCAACA
ATTCAGAATGAAACTCCAAAGAAAAAGCCCAAATTGGAATCTAAGCCATCTAATGGAGATAGCTCTATAA
ATCAGTCAGCAGATAGTGGGGGAACAGACAATTTTGTCCTTATAAGTCAATTGAAAGAAGAAGTGATGTC
ACTTAAGCGTCTCTTACAGCAGAGAGACCAGACCATTTTAGAAAAAGATAAAAAGTTAACTGAACTAAAG
GCAGACTTTCAGTACCAAGAGTCAAATTTGAGAACAAAAATGAACAGTATGGAAAAAGCCCACAAAGAAA
CTGTGGAACAACTTCAGGCCAAAAACAGAGAACTACTCAAACAGGTCGCAGCATTATCAAAGGGTAAAAA
ATTTGACAAAAGTGGAAGCATACTAACATCTCCTTGA

Translation (338 aa):
MAASALYACTKCTQRYPFEELSQGQQLCKECRIAHPIVKCTYCRSEFQQESKTNTICKKCAQNVKQFGTP
KPCQYCNIIAAFIGTKCQRCTNSEKKYGPPQTCEQCKQQCAFDRKEEGRRKVDGKLLCWLCTLSYKRVLQ
KTKEQRKSLGSSHSNSSSSSLTEKDQHHPKHHHHHHHHHHRHSSSHHKISNLSPEEEQGLWKQSHKSSAT
IQNETPKKKPKLESKPSNGDSSINQSADSGGTDNFVLISQLKEEVMSLKRLLQQRDQTILEKDKKLTELK
ADFQYQESNLRTKMNSMEKAHKETVEQLQAKNRELLKQVAALSKGKKFDKSGSILTSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH