NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS81621.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81621.1 Public Homo sapiens 11 KBTBD3 24 110 108 CCDS HistoryNCBI Gene:143879Re-query CCDS DB by CCDS ID:81621.1Re-query CCDS DB by GeneID:143879See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81621.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000534815.1 ENSP00000431910.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000534815.1Link to Ensembl Protein Viewer:ENSP00000431910.1Re-query CCDS DB by Nucleotide ID:ENST00000534815Re-query CCDS DB by Protein ID:ENSP00000431910
Original member Current member NCBI NM_001330359.2 NP_001317288.1 Accepted alive Link to Nucleotide Sequence:NM_001330359.2Link to Protein Sequence:NP_001317288.1Re-query CCDS DB by Nucleotide ID:NM_001330359Re-query CCDS DB by Protein ID:NP_001317288Link to BLAST:NP_001317288.1

Chromosomal Locations for CCDS 81621.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 106052850 106054451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1602 nt):
ATGTTTGAAGTAAACATGAAAGAAAGAGATGATGGAAGTGTTACCATTACTAATTTGTCCTCCAAGGCAG
TAAAAGCATTTCTCGATTATGCCTATACTGGAAAAACAAAAATAACAGATGATAATGTGGAAATGTTCTT
CCAGTTGTCATCATTTCTTCAAGTTTCCTTCCTATCCAAAGCTTGCAGTGACTTTTTAATAAAAAGTATT
AATCTTGTCAATTGTTTACAGTTATTATCTATATCAGATAGCTATGGCTCCACCAGTTTGTTTGATCATG
CATTACACTTTGTACAACATCACTTTTCTTTATTATTTAAATCCAGTGATTTCTTAGAGATGAATTTTGG
AGTACTACAGAAATGTCTGGAATCAGATGAATTAAATGTTCCTGAAGAAGAAATGGTACTGAAAGTTGTC
CTTAGTTGGACTAAACATAACTTAGAATCAAGGCAAAAGTATCTGCCTCATTTGATTGAAAAAGTGAGAT
TACATCAGTTATCTGAGGAGACACTTCAGGACTGTCTGTTCAATGAAGAGAGTTTACTCAAAAGCACAAA
CTGTTTTGACATAATCATGGATGCAATTAAGTGTGTGCAAGGTTCTGGTGGACTCTTCCCTGATGCTCGA
CCATCCACAACTGAGAAATACATATTCATTCACAAAACTGAGGAAAATGGAGAAAATCAATATACATTTT
GCTATAACATTAAATCTGATTCATGGAAAATACTGCCGCAATCACACCTGATTGATTTGCCAGGATCTAG
TCTTTCGAGTTACGGAGAGAAAATATTCTTGACAGGTGGTTGCAAAGGGAAATGTTGTCGAACGGTTCGA
CTGCATATTGCCGAGTCATATCATGATGCCACTGATCAAACCTGGTGCTACTGTCCAGTGAAAAATGATT
TCTTCTTGGTATCAACTATGAAAACACCAAGAACCATGCATACATCAGTTATGGCTCTCGATAGATTATT
TGTCATAGGTGGAAAAACTAGAGGATCCCGGGACATTAAAAGTCTCTTAGATGTTGAATCTTACAATCCT
CTTTCCAAAGAATGGATATCTGTTAGCCCATTACCCAGAGGCATATACTATCCAGAAGCAAGCACATGCC
AAAATGTAATTTATGTTCTTGGATCAGAGGTAGAGATTACAGATGCTTTTAACCCATCACTTGATTGCTT
TTTTAAATACAATGCTACAACTGATCAGTGGTCTGAACTAGTAGCAGAGTTTGGGCAATTTTTTCATGCA
ACATTAATTAAAGCTGTACCAGTAAACTGTACACTGTATATATGTGACCTTTCCACCTATAAGGTTTATA
GTTTTTGTCCAGACACTTGTGTTTGGAAAGGCGAAGGATCTTTTGAGTGTGCAGGCTTTAATGCAGGTGC
AATTGGAATTGAAGATAAAATTTATATATTAGGTGGTGATTATGCACCAGATGAAATCACAGATGAAGTG
CAGGTCTACCACAGCAACAGGTCTGAATGGGAAGAAGTTTCACCAATGCCTAGAGCCTTAACAGAATTTT
ACTGCCAGGTGATTCAGTTTAATAAATACAGAGACCCATGGTTTTCTAATCTATGTGCTTGA

Translation (533 aa):
MFEVNMKERDDGSVTITNLSSKAVKAFLDYAYTGKTKITDDNVEMFFQLSSFLQVSFLSKACSDFLIKSI
NLVNCLQLLSISDSYGSTSLFDHALHFVQHHFSLLFKSSDFLEMNFGVLQKCLESDELNVPEEEMVLKVV
LSWTKHNLESRQKYLPHLIEKVRLHQLSEETLQDCLFNEESLLKSTNCFDIIMDAIKCVQGSGGLFPDAR
PSTTEKYIFIHKTEENGENQYTFCYNIKSDSWKILPQSHLIDLPGSSLSSYGEKIFLTGGCKGKCCRTVR
LHIAESYHDATDQTWCYCPVKNDFFLVSTMKTPRTMHTSVMALDRLFVIGGKTRGSRDIKSLLDVESYNP
LSKEWISVSPLPRGIYYPEASTCQNVIYVLGSEVEITDAFNPSLDCFFKYNATTDQWSELVAEFGQFFHA
TLIKAVPVNCTLYICDLSTYKVYSFCPDTCVWKGEGSFECAGFNAGAIGIEDKIYILGGDYAPDEITDEV
QVYHSNRSEWEEVSPMPRALTEFYCQVIQFNKYRDPWFSNLCA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH