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Report for CCDS81701.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81701.1 Public Homo sapiens 12 NAB2 24 110 108 CCDS HistoryNCBI Gene:4665Re-query CCDS DB by CCDS ID:81701.1Re-query CCDS DB by GeneID:4665See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81701.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000342556.6 ENSP00000341491.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000342556.6Link to Ensembl Protein Viewer:ENSP00000341491.6Re-query CCDS DB by Nucleotide ID:ENST00000342556Re-query CCDS DB by Protein ID:ENSP00000341491
Original member Current member NCBI NM_001330305.2 NP_001317234.1 Accepted alive Link to Nucleotide Sequence:NM_001330305.2Link to Protein Sequence:NP_001317234.1Re-query CCDS DB by Nucleotide ID:NM_001330305Re-query CCDS DB by Protein ID:NP_001317234Link to BLAST:NP_001317234.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317234.1 461 Q15742-3 461 100% 0 0

Chromosomal Locations for CCDS 81701.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 57089272 57089354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57091125 57091998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57092448 57092581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57092917 57092968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57093063 57093195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57094612 57094721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1386 nt):
ATGCACAGAGCGCCTTCCCCCACAGCCGAGCAGCCGCCGGGCGGAGGGGACAGCGCCCGCCGGACCCTGC
AGCCCAGACTCAAGCCCAGTGCCCGAGCCATGGCACTGCCTCGGACGCTGGGGGAGCTGCAGCTGTACCG
GGTCCTGCAGCGCGCCAACCTCCTTTCCTACTATGAGACCTTCATCCAGCAGGGAGGGGACGACGTGCAG
CAGCTGTGTGAGGCGGGTGAGGAGGAGTTTCTGGAGATCATGGCACTTGTGGGCATGGCCACCAAGCCCC
TCCATGTCCGGCGCCTGCAGAAGGCACTGAGAGAGTGGGCCACCAATCCAGGGCTCTTCAGTCAACCAGT
GCCTGCTGTTCCCGTCTCCAGCATCCCGCTCTTCAAGATCTCTGAGACTGCGGGTACCCGGAAAGGGAGC
ATGAGCAATGGGCATGGCAGCCCAGGGGAAAAGGCAGGCAGTGCCCGCAGTTTTAGCCCCAAGAGCCCCC
TTGAACTTGGAGAGAAGCTATCACCACTGCCTGGGGGACCTGGGGCAGGGGACCCCCGGATCTGGCCAGG
CCGGAGCACTCCAGAGTCGGACGTTGGGGCAGGAGGAGAAGAGGAGGCTGGCTCGCCCCCCTTCTCCCCC
CCTGCAGGGGGAGGAGTCCCTGAGGGGACTGGGGCTGGGGGGCTGGCAGCAGGTGGGACTGGGGGTGGTC
CAGACCGACTGGAGCCAGAGATGGTACGCATGGTGGTGGAAAGTGTGGAGAGGATCTTCCGGAGCTTCCC
AAGGGGGGATGCTGGGGAGGTCACATCCCTGCTAAAGCTGAATAAGAAGCTGGCACGGAGCGTTGGGCAC
ATCTTTGAGATGGATGATAATGACAGCCAGAAGGAAGAGGAGATCCGCAAATACAGCATCATCTATGGCC
GTTTCGACTCTAAGCGGCGGGAGGGCAAGCAGCTCAGCCTGCACGAGCTCACCATCAACGAGGCTGCTGC
CCAGTTCTGCATGAGGGACAACACGCTCTTATTACGGAGAGTGGAGCTCTTCTCTTTGTCCCGCCAAGTA
GCCCGAGAGAGCACCTACTTGTCCTCCTTGAAGGGCTCCAGGCTTCACCCTGAAGAACTGGGAGGCCCTC
CACTGAAGAAGCTGAAACAAGAGGTTGGAGAACAGAGTCACCCTGAAATCCAGCAGCCTCCCCCAGGCCC
TGAGTCCTATGTACCCCCATACCGCCCCAGCCTGGAGGAGGACAGCGCCAGCCTGTCTGGGGAGAGTCTG
GATGGACATTTGCAGGAGTTCGAGGAAGGGCTGCTGGACAGATGTCCTGCCCCAGGACCCCATCCCGCGC
TGGTGGAGGGTCGCAGGAGCAGCGTGAAAGTGGAGGCTGAGGCCAGCCGGCAGTGA

Translation (461 aa):
MHRAPSPTAEQPPGGGDSARRTLQPRLKPSARAMALPRTLGELQLYRVLQRANLLSYYETFIQQGGDDVQ
QLCEAGEEEFLEIMALVGMATKPLHVRRLQKALREWATNPGLFSQPVPAVPVSSIPLFKISETAGTRKGS
MSNGHGSPGEKAGSARSFSPKSPLELGEKLSPLPGGPGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSP
PAGGGVPEGTGAGGLAAGGTGGGPDRLEPEMVRMVVESVERIFRSFPRGDAGEVTSLLKLNKKLARSVGH
IFEMDDNDSQKEEEIRKYSIIYGRFDSKRREGKQLSLHELTINEAAAQFCMRDNTLLLRRVELFSLSRQV
ARESTYLSSLKGSRLHPEELGGPPLKKLKQEVGEQSHPEIQQPPPGPESYVPPYRPSLEEDSASLSGESL
DGHLQEFEEGLLDRCPAPGPHPALVEGRRSSVKVEAEASRQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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