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Report for CCDS81720.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81720.1 Public Homo sapiens 12 CRADD 24 110 108 CCDS HistoryNCBI Gene:8738Re-query CCDS DB by CCDS ID:81720.1Re-query CCDS DB by GeneID:8738See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81720.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000552033.5 ENSP00000449664.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000552033.5Link to Ensembl Protein Viewer:ENSP00000449664.1Re-query CCDS DB by Nucleotide ID:ENST00000552033Re-query CCDS DB by Protein ID:ENSP00000449664
Original member Current member NCBI NM_001320101.3 NP_001307030.1 Accepted alive Link to Nucleotide Sequence:NM_001320101.3Link to Protein Sequence:NP_001307030.1Re-query CCDS DB by Nucleotide ID:NM_001320101Re-query CCDS DB by Protein ID:NP_001307030Link to BLAST:NP_001307030.1

Chromosomal Locations for CCDS 81720.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 93678775 93679072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 93738404 93738453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (348 nt):
ATGGAGGCCAGAGACAAACAAGTACTCCGCTCACTTCGCCTGGAGCTGGGTGCAGAGGTATTGGTGGAGG
GACTGGTTCTTCAGTACCTCTACCAGGAAGGAATCTTGACGGAAAACCATATTCAAGAAATCAATGCTCA
AACCACAGGCCTCCGGAAAACAATGCTCCTGCTGGATATCCTACCTTCCAGGGGCCCTAAAGCATTTGAT
ACATTCCTAGATTCCCTACAGGAGTTTCCCTGGGTCAGGGAGAAGCTGAAGAAGGCAAGGGAAGAGGCCA
TGACCGACCTGCCTGCAGTTGCCATCATCAGGCTTCCTAGAGAATTGAGCCTGCCCACTCTGTTATGA

Translation (115 aa):
MEARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEINAQTTGLRKTMLLLDILPSRGPKAFD
TFLDSLQEFPWVREKLKKAREEAMTDLPAVAIIRLPRELSLPTLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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