CCDS Report for Consensus CDS

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Report for CCDS81792.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
81792.1	Public	Homo sapiens	14	RNF31	24	110	108

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81792.1

Original	Current	Source	Nucleotide ID	Protein ID	MANE	Status in CCDS	Seq. Status	Links
		EBI	ENST00000559275.5	ENSP00000453574.1		Accepted	alive
		NCBI	NM_001310332.2	NP_001297261.1		Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_001297261.1	921	Q96EP0-3	921	100%	0	0

Chromosomal Locations for CCDS 81792.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)

Genome Browser links:

Chromosome	Start	Stop
14	24148436	24148477
14	24148642	24148701
14	24148801	24148876
14	24149406	24149583
14	24150061	24150448
14	24150598	24150888
14	24151131	24151379
14	24151485	24151670
14	24151786	24151992
14	24155157	24155330
14	24155414	24155512
14	24155603	24155692
14	24157290	24157404
14	24157520	24157638
14	24157898	24158011
14	24158142	24158199
14	24159864	24159960
14	24160239	24160407
14	24160520	24160573

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2766 nt):
ATGGACTTATGCACCAGGGCTGGGGAGCCCAGCCTAACTCAAAATACTCATCCAAGACAGCAGGCACTGG AGCAGCTGTTGGAAGACAAGGTTGAAGATGATATGCTGCAGCTTTCAGAATTTGACCCCCTATTGAGAGA GATTGCTCCTGGCCCCCTCACCACACCCTCTGTCCCAGGCTCCACTCCTGGTCCCTGCTTCCTCTGTGGT TCTGCCCCAGGCACACTGCACTGCCCATCCTGTAAACAGGCCCTGTGTCCAGCCTGTGACCACCTGTTCC ATGGACACCCATCCCGTGCTCATCACCTCCGCCAGACCCTGCCTGGGGTCCTGCAGGGTACCCACCTGAG CCCCAGTTTACCTGCCTCAGCCCAACCACGGCCCCAGTCGACCTCCCTGCTGGCCCTGGGAGACAGCTCT CTTTCTTCCCCTAATCCTGCAAGTGCTCATTTGCCCTGGCACTGTGCTGCCTGTGCCATGCTAAATGAGC CTTGGGCAGTGCTCTGTGTGGCCTGTGATCGGCCCCGAGGCTGTAAGGGGTTGGGGTTGGGAACTGAGGG TCCCCAAGGAACTGGAGGCCTAGAACCTGATCTTGCACGGGGTCGGTGGGCCTGCCAGAGCTGTACCTTT GAGAATGAGGCAGCTGCTGTGCTATGTTCCATATGTGAGCGACCTCGGCTGGCCCAGCCTCCCAGCTTGG TGGTGGATTCCCGAGATGCTGGCATTTGCCTGCAACCCCTTCAGCAGGGGGATGCTTTGCTGGCCTCTGC CCAGAGTCAAGTCTGGTACTGTATTCACTGTACCTTCTGCAACTCGAGCCCTGGCTGGGTGTGTGTTATG TGCAACCGGACTAGTAGCCCCATTCCAGCACAACATGCCCCCCGGCCCTATGCCAGCTCTTTGGAAAAGG GACCCCCCAAGCCTGGGCCCCCACGACGCCTTAGTGCCCCCCTGCCCAGTTCCTGTGGAGATCCTGAGAA GCAGCGCCAAGACAAGATGCGGGAAGAAGGCCTCCAGCTAGTGAGCATGATCCGGGAAGGGGAAGCCGCA GGTGCCTGTCCAGAGGAGATCTTCTCGGCTCTGCAGTACTCGGGCACTGAGGTGCCTCTGCAGTGGTTGC GCTCAGAACTGCCCTACGTCCTGGAGATGGTGGCTGAGCTGGCTGGACAGCAGGACCCTGGGCTGGGTGC CTTTTCCTGTCAGGAGGCCCGGAGAGCCTGGCTGGATCGTCATGGCAACCTTGATGAAGCTGTGGAGGAG TGTGTGAGGACCAGGCGAAGGAAGGTGCAGGAGCTCCAGTCTCTAGGCTTTGGGCCTGAGGAGGGGTCTC TCCAGGCATTGTTCCAGCACGGAGGTGATGTGTCACGGGCCCTGACTGAGCTACAGCGCCAACGCCTAGA GCCCTTCCGCCAGCGCCTCTGGGACAGTGGCCCTGAGCCCACCCCTTCCTGGGATGGGCCAGACAAGCAG AGCCTGGTCAGGCGGCTTTTGGCAGTCTACGCACTCCCCAGCTGGGGCCGGGCAGAGCTGGCACTGTCAC TGCTGCAGGAGACACCCAGGAACTATGAGTTGGGGGATGTGGTAGAAGCTGTGAGGCACAGCCAGGACCG GGCCTTCCTGCGCCGCTTGCTTGCCCAGGAGTGTGCCGTGTGTGGCTGGGCCCTGCCCCACAACCGGATG CAGGCCCTGACTTCCTGTGAGTGCACCATCTGTCCTGACTGCTTCCGCCAGCACTTCACCATCGCCTTGA AGGAGAAGCACATCACAGACATGGTGTGCCCTGCCTGTGGCCGCCCCGACCTCACCGATGACACACAGTT GCTCAGCTACTTCTCTACCCTTGACATCCAGCTTCGCGAGAGCCTAGAGCCAGATGCCTATGCGTTGTTC CATAAGAAGCTGACCGAGGGTGTGCTGATGCGGGACCCCAAGTTCTTGTGGTGTGCCCAGTGCTCCTTTG GCTTCATATATGAGCGTGAGCAGCTGGAGGCAACTTGTCCCCAGTGTCACCAGACCTTCTGTGTGCGCTG CAAGCGCCAGTGGGAGGAGCAGCACCGAGGTCGGAGCTGTGAGGACTTCCAGAACTGGAAACGCATGAAC GACCCAGAATACCAGGCCCAGGGCCTAGCAATGTATCTTCAGGAAAACGGCATTGACTGCCCCAAATGCA AGTTCTCGTACGCCCTGGCCCGAGGAGGCTGCATGCACTTTCACTGTACCCAGTGCCGCCACCAGTTCTG CAGCGGCTGCTACAATGCCTTTTACGCCAAGAATAAATGTCCAGAGCCTAACTGCAGGGTGAAAAAGTCC CTGCACGGCCACCACCCTCGAGACTGCCTCTTCTACCTGCGGGACTGGACTGCTCTCCGGCTTCAGAAGC TGCTACAGGACAATAACGTCATGTTTAATACAGAGCCTCCAGCTGGGGCCCGGGCAGTCCCTGGAGGCGG CTGCCGAGTGATAGAGCAGAAGGAGGTTCCCAATGGGCTCAGGGACGAAGCTTGTGGCAAGGAAACTCCA GCTGGCTATGCCGGCCTGTGCCAGGCACACTACAAAGAGTATCTTGTGAGCCTCATCAATGCCCACTCGC TGGACCCAGCCACCTTGTATGAGGTGGAAGAGCTGGAGACGGCCACTGAGCGCTACCTGCACGTACGCCC CCAGCCTTTGGCTGGAGAGGATCCCCCTGCTTACCAGGCCCGCTTGTTACAGAAGCTGACAGAAGAGGTA CCCTTGGGACAGAGTATCCCCCGCAGGCGGAAGTAG
Translation (921 aa):
MDLCTRAGEPSLTQNTHPRQQALEQLLEDKVEDDMLQLSEFDPLLREIAPGPLTTPSVPGSTPGPCFLCG SAPGTLHCPSCKQALCPACDHLFHGHPSRAHHLRQTLPGVLQGTHLSPSLPASAQPRPQSTSLLALGDSS LSSPNPASAHLPWHCAACAMLNEPWAVLCVACDRPRGCKGLGLGTEGPQGTGGLEPDLARGRWACQSCTF ENEAAAVLCSICERPRLAQPPSLVVDSRDAGICLQPLQQGDALLASAQSQVWYCIHCTFCNSSPGWVCVM CNRTSSPIPAQHAPRPYASSLEKGPPKPGPPRRLSAPLPSSCGDPEKQRQDKMREEGLQLVSMIREGEAA GACPEEIFSALQYSGTEVPLQWLRSELPYVLEMVAELAGQQDPGLGAFSCQEARRAWLDRHGNLDEAVEE CVRTRRRKVQELQSLGFGPEEGSLQALFQHGGDVSRALTELQRQRLEPFRQRLWDSGPEPTPSWDGPDKQ SLVRRLLAVYALPSWGRAELALSLLQETPRNYELGDVVEAVRHSQDRAFLRRLLAQECAVCGWALPHNRM QALTSCECTICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTQLLSYFSTLDIQLRESLEPDAYALF HKKLTEGVLMRDPKFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRMN DPEYQAQGLAMYLQENGIDCPKCKFSYALARGGCMHFHCTQCRHQFCSGCYNAFYAKNKCPEPNCRVKKS LHGHHPRDCLFYLRDWTALRLQKLLQDNNVMFNTEPPAGARAVPGGGCRVIEQKEVPNGLRDEACGKETP AGYAGLCQAHYKEYLVSLINAHSLDPATLYEVEELETATERYLHVRPQPLAGEDPPAYQARLLQKLTEEV PLGQSIPRRRK

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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