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Report for CCDS81914.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81914.1 Public Homo sapiens 15 TMED3 24 110 108 CCDS HistoryNCBI Gene:23423Re-query CCDS DB by CCDS ID:81914.1Re-query CCDS DB by GeneID:23423See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81914.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000424155.6 ENSP00000414983.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000424155.6Link to Ensembl Protein Viewer:ENSP00000414983.2Re-query CCDS DB by Nucleotide ID:ENST00000424155Re-query CCDS DB by Protein ID:ENSP00000414983
Original member Current member NCBI NM_001330376.2 NP_001317305.1 Accepted alive Link to Nucleotide Sequence:NM_001330376.2Link to Protein Sequence:NP_001317305.1Re-query CCDS DB by Nucleotide ID:NM_001330376Re-query CCDS DB by Protein ID:NP_001317305Link to BLAST:NP_001317305.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317305.1 173 Q9Y3Q3-2 173 100% 0 0

Chromosomal Locations for CCDS 81914.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 79311250 79311417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79313757 79314005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79411400 79411504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (522 nt):
ATGGGCAGCACTGTCCCGCGCTCCGCCTCCGTGCTGCTTCTGCTGCTGCTCCTGCGCCGGGCCGAGCAGC
CCTGCGGGGCCGAGCTCACCTTCGAGCTGCCGGACAACGCCAAGCAGTGCTTCCACGAGGAGGTGGAGCA
GGGCGTGAAGTTCTCCCTGGATTACCAGGTCATCACTGGAGGCCACTACGATGTTGACTGCTATGTAGAG
GACCCCCAGGGGAACACCATCTACAGAGAAACGAAGAAGCAGTACGACAGCTTCACGTACCGGGCTGAAG
TCAAGGGCGTTTATCAGTTTTGCTTCAGTAATGAGTTTTCCACCTTCTCTCACAAGACCGTCTACTTTGA
CTTTCAAGTGGGCGATGAGCCTCCCATTCTCCCAGACATGGGGAACAGGGTCACAGCTCTCACCCAGAGA
TTCAGAGGAGCTTATTGGAAGGAGGTGGACAAGATGGTCGACTATATGCAGCCAGGCGGAACACCTGCCA
CCGAGGGACTGGGACGACTGGCACCCTCCTAA

Translation (173 aa):
MGSTVPRSASVLLLLLLLRRAEQPCGAELTFELPDNAKQCFHEEVEQGVKFSLDYQVITGGHYDVDCYVE
DPQGNTIYRETKKQYDSFTYRAEVKGVYQFCFSNEFSTFSHKTVYFDFQVGDEPPILPDMGNRVTALTQR
FRGAYWKEVDKMVDYMQPGGTPATEGLGRLAPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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