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Report for CCDS81944.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81944.1 Public Homo sapiens 16 UBALD1 24 110 108 CCDS HistoryNCBI Gene:124402Re-query CCDS DB by CCDS ID:81944.1Re-query CCDS DB by GeneID:124402See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81944.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000587615.1 ENSP00000466404.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000587615.1Link to Ensembl Protein Viewer:ENSP00000466404.1Re-query CCDS DB by Nucleotide ID:ENST00000587615Re-query CCDS DB by Protein ID:ENSP00000466404
Original member Current member NCBI NM_001330467.2 NP_001317396.1 Accepted alive Link to Nucleotide Sequence:NM_001330467.2Link to Protein Sequence:NP_001317396.1Re-query CCDS DB by Nucleotide ID:NM_001330467Re-query CCDS DB by Protein ID:NP_001317396Link to BLAST:NP_001317396.1

Chromosomal Locations for CCDS 81944.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 4609633 4609908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4610493 4610555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4614678 4614797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (459 nt):
ATGTCCGTGAACATGGACGAGCTCAAGCACCAGGTCATGATCAACCAGTTCGTGCTGACGGCGGGCTGCG
CGGCCGACCAGGCGAAGCAACTGCTGCAGGCGGCCCACTGGCAGTTCGAGACAGCCCTCAGCGCCTTTTT
CCAGGAGACCAACATCCCCTACAGCCACCATCACCACCAGATGGCCTCCGAGAGCTTCCACAGCGGTGGC
AGCGGCAGCCCGATGGCCGCGACAGCCACGTCACCCCCGCCACACTTCCCCCATGCCGCCACCAGCAGCT
CTGCGGCCTCCAGCTGGCCCACGGCGGCCTCGCCCCCGGGGGGCCCACAGCACCACCAGCCACAGCCGCC
CCTGTGGACTCCAACACCCCCTTCTCCGGCTTCAGACTGGCCACCCCTGGCCCCCCAACAGGCCACCTCA
GAACCCAGGGCCCACCCTGCCATGGAGGCAGAGAGATAA

Translation (152 aa):
MSVNMDELKHQVMINQFVLTAGCAADQAKQLLQAAHWQFETALSAFFQETNIPYSHHHHQMASESFHSGG
SGSPMAATATSPPPHFPHAATSSSAASSWPTAASPPGGPQHHQPQPPLWTPTPPSPASDWPPLAPQQATS
EPRAHPAMEAER


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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