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Report for CCDS81991.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81991.1 Public Homo sapiens 16 USB1 24 110 108 CCDS HistoryNCBI Gene:79650Re-query CCDS DB by CCDS ID:81991.1Re-query CCDS DB by GeneID:79650See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81991.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000561743.5 ENSP00000454928.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000561743.5Link to Ensembl Protein Viewer:ENSP00000454928.1Re-query CCDS DB by Nucleotide ID:ENST00000561743Re-query CCDS DB by Protein ID:ENSP00000454928
Original member Current member EBI ENST00000698444.1 ENSP00000513726.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000698444.1Link to Ensembl Protein Viewer:ENSP00000513726.1Re-query CCDS DB by Nucleotide ID:ENST00000698444Re-query CCDS DB by Protein ID:ENSP00000513726
Original member Current member NCBI NM_001330568.2 NP_001317497.1 Accepted alive Link to Nucleotide Sequence:NM_001330568.2Link to Protein Sequence:NP_001317497.1Re-query CCDS DB by Nucleotide ID:NM_001330568Re-query CCDS DB by Protein ID:NP_001317497Link to BLAST:NP_001317497.1

Chromosomal Locations for CCDS 81991.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 58002534 58002645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58009929 58010112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58014273 58014326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58017334 58017439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58018972 58019055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58020141 58020245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (645 nt):
ATGTTCCCGGGCACCGAGGAGGGGCCTGAAGATGACAGCACAAAACACGGGGGACGGGTGCGCACCTTCC
CCCACGAGCGAGGCAACTGGGCCACCCACGTCTATGTACCATATGAAGCCAAGGAGGAGTTCCTGGATCT
GCTTGATGTGTTGCTGCCCCATGCCCAGACATATGTCCCCCGGCTGGTAAGGATGAAGGTGTTCCACCTC
AGCCTGTCCCAGAGTGTGGTTCTGCGCCACCACTGGATCCTCCCCTTCGTGCAGGCTCTGAAAGCCCGTA
TGACCTCCTTCCACAGATTCTTCTTTACTGCCAACCAGGTAAAGATTTACACCAATCAAGAGAAAACCAG
GACCTTTATTGGGCTTGAGGTCACTTCAGGGCATGCCCAGTTCCTGGACCTGGTTTCAGAGGTGGACAGA
GTCATGGAGGAATTCAACCTCACCACTTTCTACCAGGATCCTTCTTTCCACCTCAGCCTGGCCTGGTGTG
TGGGTGATGCACGTCTCCAGCTGGAGGGGCAGTGCCTGCAGGAACTACAGGCAATCGTGGATGGGTTTGA
AGATGCTGAGGTGCTGCTGCGCGTGCACACTGAGCAAGTCCGCTGCAAGTCTGGGAACAAGTTCTTCTCG
ATGCCTTTGAAGTGA

Translation (214 aa):
MFPGTEEGPEDDSTKHGGRVRTFPHERGNWATHVYVPYEAKEEFLDLLDVLLPHAQTYVPRLVRMKVFHL
SLSQSVVLRHHWILPFVQALKARMTSFHRFFFTANQVKIYTNQEKTRTFIGLEVTSGHAQFLDLVSEVDR
VMEEFNLTTFYQDPSFHLSLAWCVGDARLQLEGQCLQELQAIVDGFEDAEVLLRVHTEQVRCKSGNKFFS
MPLK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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