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Report for CCDS82150.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82150.1 Public Homo sapiens 17 NFE2L1 24 110 108 CCDS HistoryNCBI Gene:4779Re-query CCDS DB by CCDS ID:82150.1Re-query CCDS DB by GeneID:4779See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82150.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357480.9 ENSP00000350072.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000357480.9Link to Ensembl Protein Viewer:ENSP00000350072.5Re-query CCDS DB by Nucleotide ID:ENST00000357480Re-query CCDS DB by Protein ID:ENSP00000350072
Original member Current member EBI ENST00000585291.5 ENSP00000461960.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000585291.5Link to Ensembl Protein Viewer:ENSP00000461960.1Re-query CCDS DB by Nucleotide ID:ENST00000585291Re-query CCDS DB by Protein ID:ENSP00000461960
Original member Current member NCBI NM_001330262.2 NP_001317191.1 Accepted alive Link to Nucleotide Sequence:NM_001330262.2Link to Protein Sequence:NP_001317191.1Re-query CCDS DB by Nucleotide ID:NM_001330262Re-query CCDS DB by Protein ID:NP_001317191Link to BLAST:NP_001317191.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317191.1 742 Q14494-2 742 100% 0 0

Chromosomal Locations for CCDS 82150.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 48051119 48051628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48056386 48056598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48057344 48057502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48058295 48059641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2229 nt):
ATGCTTTCTCTGAAGAAATACTTAACGGAAGGACTTCTCCAGTTCACCATTCTGCTGAGTTTGATTGGGG
TACGGGTGGACGTGGATACTTACCTGACCTCACAGCTTCCCCCACTCCGGGAGATCATCCTGGGGCCCAG
TTCTGCCTATACTCAGACCCAGTTCCACAACCTGAGGAATACCTTGGATGGCTATGGTATCCACCCCAAG
AGCATAGACCTGGACAATTACTTCACTGCCCGGCGGCTCCTCAGTCAGGTGAGGGCCCTGGACAGGTTCC
AGGTGCCAACCACTGAGGTAAATGCCTGGCTGGTTCACCGAGACCCAGAGGGGTCTGTCTCTGGCAGTCA
GCCCAACTCAGGCCTCGCCCTCGAGAGTTCCAGTGGCCTCCAAGATGTGACAGGCCCAGACAACGGGGTG
CGAGAAAGCGAAACGGAGCAGGGATTCGGTGAAGATTTGGAGGATTTGGGGGCTGTAGCCCCCCCAGTCA
GTGGAGACTTAACCAAAGAGGACATAGATCTGATTGACATCCTTTGGCGACAGGATATTGATCTGGGGGC
TGGGCGTGAGGTTTTTGACTATAGTCACCGCCAGAAGGAGCAGGATGTGGAGAAGGAGCTGCGAGATGGA
GGCGAGCAGGACACCTGGGCAGGCGAGGGCGCGGAAGCTCTGGCACGGAACCTGCTAGTGGATGGAGAGA
CTGGGGAGAGCTTCCCTGCACAGTTTCCAGCAGACATTTCCAGCATAACAGAAGCAGTGCCTAGTGAGAG
TGAGCCCCCTGCTCTTCAAAACAACCTCTTGTCTCCTCTTCTGACCGGGACAGAGTCACCATTTGATTTG
GAACAGCAGTGGCAAGATCTCATGTCCATCATGGAAATGCAGGCCATGGAAGTGAACACATCAGCAAGTG
AAATCCTGTACAGTGCCCCTCCTGGAGACCCACTGAGCACCAACTACAGCCTTGCCCCCAACACTCCCAT
CAATCAGAATGTCAGCCTGCATCAGGCGTCCCTGGGGGGCTGCAGCCAGGACTTCTTACTCTTCAGCCCC
GAGGTGGAAAGCCTGCCTGTGGCCAGTAGCTCCACGCTGCTCCCGTTGGCCCCCAGCAATTCTACCAGCC
TCAACTCCACCTTCGGCTCCACCAACCTGACAGGGCTCTTCTTTCCACCCCAGCTCAATGGCACAGCCAA
TGACACAGCAGGCCCAGAGCTGCCTGACCCTTTGGGGGGTCTGTTAGATGAAGCTATGTTGGATGAGATC
AGCCTTATGGACCTGGCCATTGAAGAAGGCTTTAACCCTGTGCAGGCCTCCCAGCTGGAGGAGGAATTTG
ACTCTGACTCAGGCCTTTCCTTAGACTCGAGCCATAGCCCTTCTTCCCTAAGCAGCTCTGAAGGCAGTTC
TTCCTCTTCTTCCTCCTCCTCTTCCTCTTCTTCCTCTGCTTCTTCCTCTGCCTCTTCCTCCTTTTCTGAG
GAAGGTGCGGTTGGCTACAGCTCTGACTCTGAGACCCTGGATCTGGAAGAGGCCGAGGGTGCTGTGGGCT
ACCAGCCTGAGTATTCCAAGTTCTGCCGCATGAGCTACCAGGATCCAGCTCAGCTCTCATGCCTGCCCTA
CCTGGAGCACGTGGGCCACAACCACACATACAACATGGCACCCAGTGCCCTGGACTCAGCCGACCTGCCA
CCACCCAGTGCCCTCAAGAAAGGCAGCAAGGAGAAGCAGGCTGACTTCCTGGACAAGCAGATGAGCCGGG
ATGAGCACCGAGCCCGAGCCATGAAGATCCCTTTCACCAATGACAAAATCATCAACCTGCCTGTGGAGGA
GTTCAATGAACTGCTGTCCAAATACCAGTTGAGTGAAGCCCAGCTGAGCCTCATCCGAGACATCCGGCGC
CGGGGCAAGAACAAGATGGCGGCGCAGAACTGCCGCAAGCGCAAGCTGGACACCATCCTGAATCTGGAGC
GTGATGTGGAGGACCTGCAGCGTGACAAAGCCCGGCTGCTGCGGGAGAAAGTGGAGTTCCTGCGCTCCCT
GCGACAGATGAAGCAGAAGGTCCAGAGCCTGTACCAGGAGGTGTTTGGGCGGCTGCGAGATGAGAACGGA
CGACCCTACTCGCCCAGTCAGTATGCGCTCCAGTACGCCGGGGACGGCAGTGTCCTCCTCATCCCCCGCA
CGATGGCCGACCAGCAGGCCCGGCGGCAGGAGAGGAAGCCAAAGGACCGGAGAAAGTGA

Translation (742 aa):
MLSLKKYLTEGLLQFTILLSLIGVRVDVDTYLTSQLPPLREIILGPSSAYTQTQFHNLRNTLDGYGIHPK
SIDLDNYFTARRLLSQVRALDRFQVPTTEVNAWLVHRDPEGSVSGSQPNSGLALESSSGLQDVTGPDNGV
RESETEQGFGEDLEDLGAVAPPVSGDLTKEDIDLIDILWRQDIDLGAGREVFDYSHRQKEQDVEKELRDG
GEQDTWAGEGAEALARNLLVDGETGESFPAQFPADISSITEAVPSESEPPALQNNLLSPLLTGTESPFDL
EQQWQDLMSIMEMQAMEVNTSASEILYSAPPGDPLSTNYSLAPNTPINQNVSLHQASLGGCSQDFLLFSP
EVESLPVASSSTLLPLAPSNSTSLNSTFGSTNLTGLFFPPQLNGTANDTAGPELPDPLGGLLDEAMLDEI
SLMDLAIEEGFNPVQASQLEEEFDSDSGLSLDSSHSPSSLSSSEGSSSSSSSSSSSSSSASSSASSSFSE
EGAVGYSSDSETLDLEEAEGAVGYQPEYSKFCRMSYQDPAQLSCLPYLEHVGHNHTYNMAPSALDSADLP
PPSALKKGSKEKQADFLDKQMSRDEHRARAMKIPFTNDKIINLPVEEFNELLSKYQLSEAQLSLIRDIRR
RGKNKMAAQNCRKRKLDTILNLERDVEDLQRDKARLLREKVEFLRSLRQMKQKVQSLYQEVFGRLRDENG
RPYSPSQYALQYAGDGSVLLIPRTMADQQARRQERKPKDRRK


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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