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Report for CCDS82416.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82416.1 Public Homo sapiens 2 EIPR1 24 110 108 CCDS HistoryNCBI Gene:7260Re-query CCDS DB by CCDS ID:82416.1Re-query CCDS DB by GeneID:7260See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82416.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000398659.8 ENSP00000381652.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000398659.8Link to Ensembl Protein Viewer:ENSP00000381652.4Re-query CCDS DB by Nucleotide ID:ENST00000398659Re-query CCDS DB by Protein ID:ENSP00000381652
Original member Current member NCBI NM_001330530.3 NP_001317459.1 Accepted alive Link to Nucleotide Sequence:NM_001330530.3Link to Protein Sequence:NP_001317459.1Re-query CCDS DB by Nucleotide ID:NM_001330530Re-query CCDS DB by Protein ID:NP_001317459Link to BLAST:NP_001317459.1

Chromosomal Locations for CCDS 82416.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 3189334 3189508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3192414 3192581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3193999 3194166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3196881 3197017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3214149 3214248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3257299 3257455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3274339 3274419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3338017 3338149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3354550 3354633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3377648 3377689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1245 nt):
ATGGAGGACGATGCACCAGTGATCTACGGGCTGGAGTTCCAGGCACGTGCCTTAACACCTCAAACTGCAG
AAACAGATGCCATTCGGTTTTTGGTTGGGACGCAGTCTCTTAAATATGATAATCAGATCCATATCATAGA
TTTTGACGATGAAAACAACATTATAAATAAAAATGTCCTCCTCCATCAAGCGGGTGAAATCTGGCATATT
AGCGCTAGCCCTGCAGACAGAGGTGTGCTGACGACCTGCTACAACAGAACATTTTGTTGTGTGCTGTCTC
TGGATTCCTTTGGTGCTCTTGGGAAGTCAGCTGCCCAACTGTTCATAGCACTGGCAACCTCTTCAGACAG
CAAAGTCCTGACATGTGCAGCCGTGTGGAGGATGCCGAAGGAATTGGAATCAGGCAGCCACGAGTCCCCT
GATGATTCATCCAGCACTGCACAGACCCTGGAGCTGCTCTGTCACCTTGACAACACAGCCCATGGCAACA
TGGCCTGTGTCGTGTGGGAGCCAATGGGAGATGGGAAGAAAATCATTTCCTTGGCTGATAACCATATCCT
GCTGTGGGATTTACAGGAAAGCTCGAGCCAGGCTGTGCTGGCCAGCTCAGCGTCCCTGGAAGGGAAGGGA
CAACTGAAGTTCACCTCAGGACGGTGGAGCCCACATCATAACTGCACCCAGGTGGCCACAGCGAACGACA
CCACCCTCCGTGGCTGGGACACCCGGAGCATGAGCCAGATCTACTGCATAGAGAATGCCCACGGACAGCT
GGTGCGGGACCTTGACTTTAATCCCAATAAGCAGTACTACTTGGCCAGCTGCGGAGACGACTGTAAGGTG
AAGTTCTGGGACACCCGAAATGTCACCGAACCCGTGAAGACCCTGGAGGAGCACTCCCACTGGGTGTGGA
ACGTCCGCTACAACCACTCTCATGACCAGCTGGTCCTCACGGGCAGCAGTGACAGCAGAGTCATCCTTTC
CAACATGGTGTCCATCTCGTCGGAGCCCTTCGGCCACTTGGTAGACGACGATGACATCAGTGACCAGGAG
GACCACCGTTCTGAAGAGAAGAGCAAGGAGCCCCTGCAGGACAACGTGATCGCCACCTACGAGGAGCACG
AGGACAGCGTCTATGCCGTGGACTGGTCCTCGGCTGACCCGTGGCTGTTTGCCTCCCTGAGCTATGACGG
GAGGCTCGTGATCAACAGGGTGCCCAGGGCCCTGAAGTACCACATCCTGCTATGA

Translation (414 aa):
MEDDAPVIYGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQAGEIWHI
SASPADRGVLTTCYNRTFCCVLSLDSFGALGKSAAQLFIALATSSDSKVLTCAAVWRMPKELESGSHESP
DDSSSTAQTLELLCHLDNTAHGNMACVVWEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLEGKG
QLKFTSGRWSPHHNCTQVATANDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKV
KFWDTRNVTEPVKTLEEHSHWVWNVRYNHSHDQLVLTGSSDSRVILSNMVSISSEPFGHLVDDDDISDQE
DHRSEEKSKEPLQDNVIATYEEHEDSVYAVDWSSADPWLFASLSYDGRLVINRVPRALKYHILL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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