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Report for CCDS82441.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82441.1 Public Homo sapiens 2 MTA3 24 110 108 CCDS HistoryNCBI Gene:57504Re-query CCDS DB by CCDS ID:82441.1Re-query CCDS DB by GeneID:57504See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82441.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000405094.2 ENSP00000385823.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000405094.2Link to Ensembl Protein Viewer:ENSP00000385823.1Re-query CCDS DB by Nucleotide ID:ENST00000405094Re-query CCDS DB by Protein ID:ENSP00000385823
Original member Current member NCBI NM_001330442.2 NP_001317371.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001330442.2Link to Protein Sequence:NP_001317371.1Re-query CCDS DB by Nucleotide ID:NM_001330442Re-query CCDS DB by Protein ID:NP_001317371Link to BLAST:NP_001317371.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317371.1 594 Q9BTC8-1 594 100% 0 0

Chromosomal Locations for CCDS 82441.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 42568746 42568773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 42570437 42570504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 42579107 42579200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 42609458 42609584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 42640173 42640236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 42644127 42644244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 42656200 42656302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 42659763 42659862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 42682401 42682589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 42695765 42695839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 42697776 42697834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 42704194 42704318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 42707903 42708054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 42708874 42709096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 42718988 42719074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 42722889 42723035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 42753374 42753399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1785 nt):
ATGGCGGCCAACATGTACCGGGTCGGAGATTATGTCTACTTTGAGAATTCCTCCAGCAACCCATACCTAA
TAAGAAGGATAGAAGAACTCAACAAGACTGCAAGTGGCAACGTGGAAGCAAAAGTAGTATGCTTTTATAG
ACGACGTGATATTTCCAACACACTTATAATGCTCGCAGATAAGCATGCTAAAGAAATTGAGGAAGAATCT
GAAACAACAGTTGAGGCTGACTTGACCGATAAGCAGAAACATCAGTTGAAACATAGGGAACTCTTTTTGT
CACGCCAGTATGAATCTCTGCCCGCAACACATATCAGGGGAAAGTGCAGTGTTGCCCTTCTGAATGAGAC
AGAATCAGTATTGTCATATCTTGATAAGGAGGATACCTTCTTCTACTCATTGGTCTATGACCCCTCATTG
AAAACACTATTAGCTGACAAAGGTGAAATCAGAGTGGGACCTAGATATCAAGCAGACATTCCAGAAATGC
TGTTAGAAGGAGAATCAGATGAGAGGGAACAATCAAAATTGGAAGTTAAAGTTTGGGATCCAAATAGCCC
ACTTACGGATCGACAGATTGACCAGTTTTTAGTTGTAGCACGTGCTGTTGGGACATTCGCCAGAGCCCTG
GATTGCAGCAGTTCTGTGAGGCAGCCTAGTTTGCATATGAGTGCTGCTGCAGCTTCCCGAGACATCACCT
TGTTTCACGCTATGGATACATTGTATAGACACAGCTATGATTTGAGCAGTGCCATTAGTGTCTTAGTACC
ACTCGGAGGACCTGTTTTATGCAGAGATGAAATGGAGGAATGGTCAGCCTCTGAAGCTAGCTTATTTGAA
GAGGCACTGGAAAAATATGGCAAAGACTTCAATGACATACGGCAAGATTTTCTTCCTTGGAAATCATTGA
CTAGCATCATTGAATATTATTACATGTGGAAAACTACTGACAGATATGTGCAACAGAAACGTCTAAAAGC
AGCAGAAGCTGAGAGTAAACTGAAACAAGTATATATCCCAACCTACAGCAAACCAAATCCCAACCAAATA
TCCACTAGTAATGGGAAGCCTGGTGCTGTGAATGGAGCTGTGGGGACCACGTTCCAGCCTCAGAATCCTC
TCTTAGGGAGAGCCTGTGAGAGCTGCTATGCTACACAGTCTCACCAGTGGTATTCTTGGGGCCCACCTAA
TATGCAGTGTAGATTATGTGCAATTTGTTGGCTTTATTGGAAAAAATATGGAGGCTTGAAAATGCCCACC
CAGTCAGAAGAAGAGAAGTTATCTCCTAGCCCAACTACAGAGGACCCTCGTGTTAGAAGTCACGTGTCCC
GCCAGGCCATGCAGGGAATGCCAGTCCGAAACACTGGGAGTCCAAAGTCTGCAGTGAAGACCCGCCAAGC
TTTCTTCCTTCATACTACATATTTCACAAAATTTGCTCGTCAGGTCTGCAAAAATACCCTCCGGCTGCGG
CAGGCAGCAAGACGGCCGTTTGTTGCTATTAATTATGCTGCCATTAGGGCAGAATATGCAGACAGACATG
CTGAACTATCTGGAAGTCCACTGAAAAGCAAAAGCACTAGGAAGCCTTTGGCATGTATCATTGGGTATTT
AGAGATCCATCCTGCAAAGAAACCTAATGTAATTCGATCTACACCAAGCCTGCAAACCCCAACTACCAAG
CGGATGCTAACAACTCCAAATCACACATCTCTGAGCATTCTGGGGAAAAGAAACTACAGTCATCACAATG
GTCTGGATGAACTCACGTGCTGTGTGTCAGACTGA

Translation (594 aa):
MAANMYRVGDYVYFENSSSNPYLIRRIEELNKTASGNVEAKVVCFYRRRDISNTLIMLADKHAKEIEEES
ETTVEADLTDKQKHQLKHRELFLSRQYESLPATHIRGKCSVALLNETESVLSYLDKEDTFFYSLVYDPSL
KTLLADKGEIRVGPRYQADIPEMLLEGESDEREQSKLEVKVWDPNSPLTDRQIDQFLVVARAVGTFARAL
DCSSSVRQPSLHMSAAAASRDITLFHAMDTLYRHSYDLSSAISVLVPLGGPVLCRDEMEEWSASEASLFE
EALEKYGKDFNDIRQDFLPWKSLTSIIEYYYMWKTTDRYVQQKRLKAAEAESKLKQVYIPTYSKPNPNQI
STSNGKPGAVNGAVGTTFQPQNPLLGRACESCYATQSHQWYSWGPPNMQCRLCAICWLYWKKYGGLKMPT
QSEEEKLSPSPTTEDPRVRSHVSRQAMQGMPVRNTGSPKSAVKTRQAFFLHTTYFTKFARQVCKNTLRLR
QAARRPFVAINYAAIRAEYADRHAELSGSPLKSKSTRKPLACIIGYLEIHPAKKPNVIRSTPSLQTPTTK
RMLTTPNHTSLSILGKRNYSHHNGLDELTCCVSD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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