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Report for CCDS82497.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82497.1 Public Homo sapiens 2 SEPTIN10 24 110 108 CCDS HistoryNCBI Gene:151011Re-query CCDS DB by CCDS ID:82497.1Re-query CCDS DB by GeneID:151011See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82497.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356688.8 ENSP00000349116.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000356688.8Link to Ensembl Protein Viewer:ENSP00000349116.4Re-query CCDS DB by Nucleotide ID:ENST00000356688Re-query CCDS DB by Protein ID:ENSP00000349116
Original member Current member NCBI NM_001321498.2 NP_001308427.1 Accepted alive Link to Nucleotide Sequence:NM_001321498.2Link to Protein Sequence:NP_001308427.1Re-query CCDS DB by Nucleotide ID:NM_001321498Re-query CCDS DB by Protein ID:NP_001308427Link to BLAST:NP_001308427.1

Chromosomal Locations for CCDS 82497.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 109544122 109544324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 109545460 109545542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 109546050 109546237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 109553087 109553219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 109564366 109564534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 109565763 109565859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 109567815 109567976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 109574581 109574767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 109585126 109585321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 109585721 109585838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 109593051 109593119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 109613798 109613827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1635 nt):
ATGGCCTCCTCCGAGGTGGCGCGGCACCTGCTCTTTCAGTCTCACATGGCAACGAAAACAACTTGTATGT
CT
TCACAAGGATCAGATGATGAACAGATAAAAAGAGAAAACATTCGTTCGTTGACTATGTCTGGCCATGT
T
GGTTTTGAGAGTTTGCCTGATCAGCTGGTGAACAGATCCATTCAGCAAGGTTTCTGCTTTAATATTCTC
TGT
GTGGGGGAAACTGGAATTGGAAAATCAACACTGATTGACACATTGTTTAATACTAATTTTGAAGACT
AT
GAATCCTCACATTTTTGCCCAAATGTTAAACTTAAAGCTCAGACATATGAACTCCAGGAAAGTAATGT
T
CAATTGAAATTGACCATTGTGAATACAGTGGGATTTGGTGACCAAATAAATAAAGAAGAGAGCTACCAA
CCA
ATAGTTGACTACATAGATGCTCAGTTTGAGGCCTATCTCCAAGAAGAACTGAAGATTAAGCGTTCTC
TC
TTTACCTACCATGATTCTCGCATCCATGTGTGTCTCTACTTCATTTCACCGACAGGCCACTCTCTGAA
G
ACACTTGATCTCTTAACCATGAAGAACCTTGACAGCAAGGTAAACATTATACCAGTGATTGCCAAAGCA
GAT
ACGGTTTCTAAAACTGAATTACAGAAGTTTAAGATCAAGCTCATGAGTGAATTGGTCAGCAATGGCG
TC
CAGATATACCAGTTCCCAACGGATGATGACACTATTGCTAAGGTCAACGCTGCAATGAATGGACAGTT
G
CCGTTTGCTGTTGTGGGAAGTATGGATGAGGTAAAAGTCGGAAACAAGATGGTCAAAGCTCGCCAGTAC
CCT
TGGGGTGTTGTACAAGTGGAAAATGAAAACCACTGTGACTTTGTAAAGCTGCGGGAAATGCTCATTT
GT
ACAAATATGGAGGACCTGCGAGAGCAGACCCATACCAGGCACTATGAGCTTTACAGGCGCTGCAAACT
G
GAGGAAATGGGCTTTACAGATGTGGGCCCAGAAAACAAGCCAGTCAGTGTTCAAGAGACCTATGAAGCC
AAA
AGACATGAGTTCCATGGTGAACGTCAGAGGAAGGAAGAAGAAATGAAACAGATGTTTGTGCAGCGAG
TA
AAGGAGAAAGAAGCCATATTGAAAGAAGCTGAGAGAGAGCTACAGGCCAAATTTGAGCACCTTAAGAG
A
CTTCACCAAGAAGAGAGAATGAAGCTTGAAGAAAAGAGAAGACTTTTGGAAGAAGAAATAATTGCTTTC
TCT
AAAAAGAAAGCTACCTCCGAGATATTTCACAGCCAGTCCTTTCTGGCAACAGGCAGCAACCTGAGGA
AG
GACAAGGACCGTAAGAAGGAACCAGGCTGTCGATTCGAACTCCTGTGCATTGATGTCAGAGCTTGTGA
A
ACCAATGGTGGACGTAAAGACGCAGAGAAAGCTCCAATTTTTTGTAAAACAGAAGTTCCAGAGCACAGA
AGG
TCATCATCACAAGCAAACTTTATTAAAAAAAAACTAGAAGTGTGCTTTGATTTTGCTGTTATTTGTT
TT
ATCACTTCTATATTTGGTGAACAGCCACAGTTACTGATATTTATGGAAAAGTACTTTCAAGTACAAGG
T
CAATACATAAGCCAGAGTGAATGA


Translation (544 aa):
MASSEVARHLLFQSHMATKTTCMSSQGSDDEQIKRENIRSLTMSGHVGFESLPDQLVNRSIQQGFCFNIL
C
V
GETGIGKSTLIDTLFNTNFEDYESSHFCPNVKLKAQTYELQESNVQLKLTIVNTVGFGDQINKEESYQ
P
IVDYIDAQFEAYLQEELKIKRSLFTYHDSRIHVCLYFISPTGHSLKTLDLLTMKNLDSK
VNIIPVIAKA
D
TVSKTELQKFKIKLMSELVSNGVQIYQFPTDDDTIAKVNAAMN
GQLPFAVVGSMDEVKVGNKMVKARQY
P
WGVVQ
VENENHCDFVKLREMLICTNMEDLREQTHTRHYELYRRCKLEEMGFTDVGPENKPVSVQETYEA
K
RHEFHGERQRKEEEMKQMFVQRVKEKEAILKEAERE
LQAKFEHLKRLHQEERMKLEEKRRLLEEEIIAF
S
KKKATSEIFHSQSFLATGSNLRKDKDRK
KEPGCRFELLCIDVRACETNGGRKDAEKAPIFCKTEVPEHR
R
SSSQANFIKKKLEVCFDFAVICFITSIFGEQPQLLIFMEKYFQVQGQYISQSE




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser