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Report for CCDS82504.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82504.1 Public Homo sapiens 2 STEAP3 24 110 108 CCDS HistoryNCBI Gene:55240Re-query CCDS DB by CCDS ID:82504.1Re-query CCDS DB by GeneID:55240See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82504.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409811.5 ENSP00000386510.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409811.5Link to Ensembl Protein Viewer:ENSP00000386510.1Re-query CCDS DB by Nucleotide ID:ENST00000409811Re-query CCDS DB by Protein ID:ENSP00000386510
Original member Current member NCBI NM_138637.3 NP_619543.2 Accepted alive Link to Nucleotide Sequence:NM_138637.3Link to Protein Sequence:NP_619543.2Re-query CCDS DB by Nucleotide ID:NM_138637Re-query CCDS DB by Protein ID:NP_619543Link to BLAST:NP_619543.2

Chromosomal Locations for CCDS 82504.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 119245497 119245988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119247679 119248206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119254684 119254848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119257457 119257645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1374 nt):
ATGCCAGAAGAGATGGACAAGCCACTGATCAGCCTCCACCTGGTGGACAGCGATAGTAGCCTTGCCAAGG
TCCCCGATGAGGCCCCCAAAGTGGGCATCCTGGGTAGCGGGGACTTTGCCCGCTCCCTGGCCACACGCCT
GGTGGGCTCTGGCTTCAAAGTGGTGGTGGGGAGCCGCAACCCCAAACGCACAGCCAGGCTGTTTCCCTCA
GCGGCCCAAGTGACTTTCCAAGAGGAGGCAGTGAGCTCCCCGGAGGTCATCTTTGTGGCTGTGTTCCGGG
AGCACTACTCTTCACTGTGCAGTCTCAGTGACCAGCTGGCGGGCAAGATCCTGGTGGATGTGAGCAACCC
TACAGAGCAAGAGCACCTTCAGCATCGTGAGTCCAATGCTGAGTACCTGGCCTCCCTCTTCCCCACTTGC
ACAGTGGTCAAGGCCTTCAATGTCATCTCTGCCTGGACCCTGCAGGCTGGCCCAAGGGATGGTAACAGGC
AGGTGCCCATCTGCGGTGACCAGCCAGAAGCCAAGCGTGCTGTCTCGGAGATGGCGCTCGCCATGGGCTT
CATGCCCGTGGACATGGGATCCCTGGCGTCAGCCTGGGAGGTGGAGGCCATGCCCCTGCGCCTCCTCCCG
GCCTGGAAGGTGCCCACCCTGCTGGCCCTGGGGCTCTTCGTCTGCTTCTATGCCTACAACTTCGTCCGGG
ACGTTCTGCAGCCCTATGTGCAGGAAAGCCAGAACAAGTTCTTCAAGCTGCCCGTGTCCGTGGTCAACAC
CACACTGCCGTGCGTGGCCTACGTGCTGCTGTCACTCGTGTACTTGCCCGGCGTGCTGGCGGCTGCCCTG
CAGCTGCGGCGCGGCACCAAGTACCAGCGCTTCCCCGACTGGCTGGACCACTGGCTACAGCACCGCAAGC
AGATCGGGCTGCTCAGCTTCTTCTGCGCCGCCCTGCACGCCCTCTACAGCTTCTGCTTGCCGCTGCGCCG
CGCCCACCGCTACGACCTGGTCAACCTGGCAGTCAAGCAGGTCTTGGCCAACAAGAGCCACCTCTGGGTG
GAGGAGGAGGTCTGGCGGATGGAGATCTACCTCTCCCTGGGAGTGCTGGCCCTCGGCACGTTGTCCCTGC
TGGCCGTGACCTCACTGCCGTCCATTGCAAACTCGCTCAACTGGAGGGAGTTCAGCTTCGTTCAGTGTGT
GGCAACTTCCAGTGCAGGAAACACAGGCAGTGGAACCCGAAGACCTGAATCTCAGTCCCAAGACCCCCAC
TTACCTGCCCCGCATCATCAGACAAGTTTCCTAGGCCCTCGGAGCTTCTGCTGCTCACTTGTGCCTGTGT
CCACCCCATATGGTCATCAAGAGGATTTGAGCTGGACACGTTAA

Translation (457 aa):
MPEEMDKPLISLHLVDSDSSLAKVPDEAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPS
AAQVTFQEEAVSSPEVIFVAVFREHYSSLCSLSDQLAGKILVDVSNPTEQEHLQHRESNAEYLASLFPTC
TVVKAFNVISAWTLQAGPRDGNRQVPICGDQPEAKRAVSEMALAMGFMPVDMGSLASAWEVEAMPLRLLP
AWKVPTLLALGLFVCFYAYNFVRDVLQPYVQESQNKFFKLPVSVVNTTLPCVAYVLLSLVYLPGVLAAAL
QLRRGTKYQRFPDWLDHWLQHRKQIGLLSFFCAALHALYSFCLPLRRAHRYDLVNLAVKQVLANKSHLWV
EEEVWRMEIYLSLGVLALGTLSLLAVTSLPSIANSLNWREFSFVQCVATSSAGNTGSGTRRPESQSQDPH
LPAPHHQTSFLGPRSFCCSLVPVSTPYGHQEDLSWTR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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