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Report for CCDS82533.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82533.1 Public Homo sapiens 2 DYNC1I2 24 110 108 CCDS HistoryNCBI Gene:1781Re-query CCDS DB by CCDS ID:82533.1Re-query CCDS DB by GeneID:1781See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82533.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409317.5 ENSP00000386591.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409317.5Link to Ensembl Protein Viewer:ENSP00000386591.1Re-query CCDS DB by Nucleotide ID:ENST00000409317Re-query CCDS DB by Protein ID:ENSP00000386591
Original member Current member NCBI NM_001320882.2 NP_001307811.1 Accepted alive Link to Nucleotide Sequence:NM_001320882.2Link to Protein Sequence:NP_001307811.1Re-query CCDS DB by Nucleotide ID:NM_001320882Re-query CCDS DB by Protein ID:NP_001307811Link to BLAST:NP_001307811.1
Original member Current member NCBI NM_001320883.2 NP_001307812.1 Accepted alive Link to Nucleotide Sequence:NM_001320883.2Link to Protein Sequence:NP_001307812.1Re-query CCDS DB by Nucleotide ID:NM_001320883Re-query CCDS DB by Protein ID:NP_001307812Link to BLAST:NP_001307812.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001307811.1 632 Q13409-2 632 100% 0 0
NP_001307812.1 632 Q13409-2 632 100% 0 0

Chromosomal Locations for CCDS 82533.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 171690156 171690263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171692777 171692894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171707287 171707377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171712767 171712826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171715328 171715443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171725618 171725713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171725919 171726081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171726194 171726293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171726791 171726916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171727821 171727967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171728305 171728418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171728717 171728850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171729709 171729853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171744049 171744189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171745802 171745927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171747776 171747889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1899 nt):
ATGTCAGACAAAAGTGAATTAAAGGCTGAGTTGGAACGTAAGAAGCAGCGACTGGCCCAAATCAGAGAGG
AAAAGAAGAGAAAAGAAGAAGAAAGGAAAAAAAAAGAAACAGACCAGAAGAAGGAAGCTGTTGCTCCTGT
GCAAGAAGAATCAGATCTTGAAAAAAAAAGGAGAGAAGCTGAAGCATTGCTTCAAAGCATGGGGCTAACT
CCAGAATCCCCCATTGTCCCTCCTCCTATGTCTCCATCCTCCAAATCTGTGAGCACTCCAAGTGAAGCTG
GAAGCCAAGACTCTGGAGATGGCGCCGTGGGATCTAGGACGCTGCATTGGGATACAGATCCATCAGTTCT
TCAGCTTCACTCAGATTCCGATTTGGGACGAGGACCTATTAAACTTGGAATGGCTAAAATCACGCAAGTC
GACTTTCCTCCTCGAGAAATTGTCACGTATACAAAGGAAACTCAGACTCCAGTTATGGCTCAACCCAAAG
AAGATGAAGAGGAAGATGATGATGTAGTGGCTCCTAAACCACCTATTGAACCTGAAGAAGAGAAAACTTT
AAAGAAAGATGAGGAAAATGATAGTAAAGCTCCCCCTCATGAGCTGACTGAAGAAGAAAAGCAACAAATC
TTGCACTCTGAGGAATTTTTAAGTTTCTTTGACCATTCTACAAGAATTGTAGAAAGAGCTCTTTCTGAGC
AGATTAACATCTTCTTTGACTATAGTGGGAGAGATTTGGAAGACAAAGAAGGAGAGATTCAAGCAGGTGC
TAAACTGTCATTAAATCGACAATTTTTTGACGAACGTTGGTCAAAGCATCGGGTGGTTAGTTGTTTGGAT
TGGTCATCTCAGTATCCGGAGTTACTCGTGGCTTCCTATAACAACAATGAAGATGCCCCTCATGAGCCTG
ATGGTGTGGCCCTTGTATGGAATATGAAATACAAAAAAACTACCCCAGAGTATGTGTTTCACTGCCAGTC
AGCTGTGATGTCTGCCACATTTGCAAAATTTCATCCAAATCTTGTTGTTGGTGGTACATATTCAGGCCAA
ATTGTGCTTTGGGATAACCGTAGCAATAAAAGAACTCCAGTGCAAAGAACTCCACTGTCAGCAGCTGCAC
ACACACACCCTGTATATTGTGTAAATGTTGTTGGAACACAAAATGCTCACAATCTGATTAGCATCTCTAC
TGATGGAAAAATTTGTTCATGGAGTCTGGACATGCTTTCCCATCCACAGGATAGCATGGAGTTGGTTCAT
AAACAGTCAAAAGCAGTAGCTGTGACATCTATGTCCTTCCCTGTTGGAGATGTCAACAACTTTGTTGTTG
GGAGTGAAGAAGGTTCTGTGTACACAGCATGCCGCCATGGCAGCAAAGCTGGAATCAGTGAGATGTTTGA
GGGGCATCAAGGACCAATCACTGGCATCCATTGTCATGCAGCTGTTGGAGCAGTAGACTTCTCACATCTT
TTTGTCACTTCATCGTTTGACTGGACAGTAAAGCTTTGGACAACTAAGAATAACAAGCCTTTGTATTCAT
TTGAAGATAATGCAGACTATGTTTATGATGTTATGTGGTCACCTACCCACCCAGCCCTGTTTGCCTGTGT
GGATGGCATGGGGAGATTGGATTTGTGGAATCTCAATAATGACACAGAGGTACCAACTGCCAGCATTTCT
GTGGAGGGTAATCCTGCTCTTAATCGTGTGAGATGGACCCATTCTGGCAGAGAGATTGCTGTGGGTGATT
CTGAAGGACAGATTGTTATATACGATGTGGGAGAGCAGATTGCTGTTCCCCGCAATGATGAATGGGCACG
GTTTGGCCGAACACTTGCAGAAATTAATGCAAACCGAGCTGATGCAGAGGAGGAAGCAGCTACCCGAATA
CCTGCTTAG

Translation (632 aa):
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREAEALLQSMGLT
PESPIVPPPMSPSSKSVSTPSEAGSQDSGDGAVGSRTLHWDTDPSVLQLHSDSDLGRGPIKLGMAKITQV
DFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVAPKPPIEPEEEKTLKKDEENDSKAPPHELTEEEKQQI
LHSEEFLSFFDHSTRIVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLD
WSSQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQ
IVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH
KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAVGAVDFSHL
FVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASIS
VEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRNDEWARFGRTLAEINANRADAEEEAATRI
PA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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