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Report for CCDS82565.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82565.1 Public Homo sapiens 2 PTH2R 24 110 108 CCDS HistoryNCBI Gene:5746Re-query CCDS DB by CCDS ID:82565.1Re-query CCDS DB by GeneID:5746See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82565.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000617735.4 ENSP00000482485.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000617735.4Link to Ensembl Protein Viewer:ENSP00000482485.1Re-query CCDS DB by Nucleotide ID:ENST00000617735Re-query CCDS DB by Protein ID:ENSP00000482485
Original member Current member NCBI NM_001309516.2 NP_001296445.1 Accepted alive Link to Nucleotide Sequence:NM_001309516.2Link to Protein Sequence:NP_001296445.1Re-query CCDS DB by Nucleotide ID:NM_001309516Re-query CCDS DB by Protein ID:NP_001296445Link to BLAST:NP_001296445.1
Original member Current member NCBI NM_001371905.1 NP_001358834.1 Accepted alive Link to Nucleotide Sequence:NM_001371905.1Link to Protein Sequence:NP_001358834.1Re-query CCDS DB by Nucleotide ID:NM_001371905Re-query CCDS DB by Protein ID:NP_001358834Link to BLAST:NP_001358834.1
Original member Current member NCBI NM_001371906.1 NP_001358835.1 Accepted alive Link to Nucleotide Sequence:NM_001371906.1Link to Protein Sequence:NP_001358835.1Re-query CCDS DB by Nucleotide ID:NM_001371906Re-query CCDS DB by Protein ID:NP_001358835Link to BLAST:NP_001358835.1

Chromosomal Locations for CCDS 82565.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 208437804 208437881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 208442364 208442461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 208443348 208443537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 208444734 208444887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 208450749 208450809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 208459895 208459961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 208481070 208481164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 208489012 208489150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 208490639 208490680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 208493264 208493659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1320 nt):
ATGCACAGCTTAAATAAAACATGGGCCAATTATTCAGACTGCCTTCGCTTTCTGCAGCCAGATATCAGCA
TAGGAAAGCAAGAATTCTTTGAACGCCTCTATGTAATGTATACCGTTGGCTACTCCATCTCTTTTGGTTC
CTTGGCTGTGGCTATTCTCATCATTGGTTACTTCAGACGATTGCATTGCACTAGGAACTATATCCACATG
CACTTATTTGTGTCTTTCATGCTGAGAGCTACAAGCATCTTTGTCAAAGACAGAGTAGTCCATGCTCACA
TAGGAGTAAAGGAGCTGGAGTCCCTAATAATGCAGGATGACCCACAAAATTCCATTGAGGCAACTTCTGT
GGACAAATCACAATATATCGGGTGCAAGATTGCTGTTGTGATGTTTATTTACTTCCTGGCTACAAATTAT
TATTGGATCCTGGTGGAAGGTCTCTACCTGCATAATCTCATCTTTGTGGCTTTCTTTTCGGACACCAAAT
ACCTGTGGGGCTTCATCTTGATAGGCTGGGGGTTTCCAGCAGCATTTGTTGCAGCATGGGCTGTGGCACG
AGCAACTCTGGCTGATGCGAGGTGCTGGGAACTTAGTGCTGGAGACATCAAGTGGATTTATCAAGCACCG
ATCTTAGCAGCTATTGGGCTGAATTTTATTCTGTTTCTGAATACGGTTAGAGTTCTAGCTACCAAAATCT
GGGAGACCAATGCAGTTGGGCATGACACAAGGAAGCAATACAGGAAACTGGCCAAATCGACACTGGTCCT
GGTCCTAGTCTTTGGAGTGCATTACATCGTGTTCGTATGCCTGCCTCACTCCTTCACTGGGCTCGGGTGG
GAGATCCGCATGCACTGTGAGCTCTTCTTCAACTCCTTTCAGGGTTTCTTTGTGTCTATCATCTACTGCT
ACTGCAATGGAGAGGTTCAGGCAGAGGTGAAGAAGATGTGGAGTCGGTGGAACCTCTCCGTGGACTGGAA
AAGGACACCGCCATGTGGCAGCCGCAGATGCGGCTCAGTGCTCACCACCGTGACGCACAGCACCAGCAGC
CAGTCACAGGTGGCGGCCAGCACACGCATGGTGCTTATCTCTGGCAAAGCTGCCAAGATCGCCAGCAGAC
AGCCTGACAGCCACATCACTTTACCTGGCTATGTCTGGAGTAACTCAGAGCAGGACTGCCTGCCACACTC
TTTCCACGAGGAGACCAAGGAAGATAGTGGGAGGCAGGGAGATGATATTCTAATGGAGAAGCCTTCCAGG
CCTATGGAATCTAACCCAGACACTGAAGGATGCCAAGGAGAAACTGAGGATGTTCTCTGA

Translation (439 aa):
MHSLNKTWANYSDCLRFLQPDISIGKQEFFERLYVMYTVGYSISFGSLAVAILIIGYFRRLHCTRNYIHM
HLFVSFMLRATSIFVKDRVVHAHIGVKELESLIMQDDPQNSIEATSVDKSQYIGCKIAVVMFIYFLATNY
YWILVEGLYLHNLIFVAFFSDTKYLWGFILIGWGFPAAFVAAWAVARATLADARCWELSAGDIKWIYQAP
ILAAIGLNFILFLNTVRVLATKIWETNAVGHDTRKQYRKLAKSTLVLVLVFGVHYIVFVCLPHSFTGLGW
EIRMHCELFFNSFQGFFVSIIYCYCNGEVQAEVKKMWSRWNLSVDWKRTPPCGSRRCGSVLTTVTHSTSS
QSQVAASTRMVLISGKAAKIASRQPDSHITLPGYVWSNSEQDCLPHSFHEETKEDSGRQGDDILMEKPSR
PMESNPDTEGCQGETEDVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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