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Report for CCDS82670.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82670.1 Public Homo sapiens 21 PIGP 24 110 108 CCDS HistoryNCBI Gene:51227Re-query CCDS DB by CCDS ID:82670.1Re-query CCDS DB by GeneID:51227See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82670.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000399098.5 ENSP00000382049.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000399098.5Link to Ensembl Protein Viewer:ENSP00000382049.1Re-query CCDS DB by Nucleotide ID:ENST00000399098Re-query CCDS DB by Protein ID:ENSP00000382049
Original member Current member NCBI NM_016430.4 NP_057514.2 Accepted alive Link to Nucleotide Sequence:NM_016430.4Link to Protein Sequence:NP_057514.2Re-query CCDS DB by Nucleotide ID:NM_016430Re-query CCDS DB by Protein ID:NP_057514Link to BLAST:NP_057514.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057514.2 108 P57054-3 108 100% 0 0

Chromosomal Locations for CCDS 82670.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 37065582 37065712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 37067262 37067380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 37069552 37069624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 37072145 37072148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (327 nt):
ATGGTACTTTACCTCGTGTGGGCCTTTATTCCTGAATCTTGGCTAAACTCTTTAGGTTTAACCTATTGGC
CTCAAAAATATTGGGCAGTTGCATTACCTGTCTACCTCCTTATTGCTATAGTAATTGGCTACGTGCTCTT
GTTTGGGATTAACATGATGAGTACCTCTCCACTCGACTCCATCCATACAATCACAGATAACTATGCAAAA
AATCAACAGCAGAAGAAATACCAAGAGGAGGCCATTCCAGCCTTAAGAGATATTTCTATTAGTGAAGTAA
ACCAAATGTTCTTTCTTGCAGCCAAAGAACTTTACACCAAAAACTGA

Translation (108 aa):
MVLYLVWAFIPESWLNSLGLTYWPQKYWAVALPVYLLIAIVIGYVLLFGINMMSTSPLDSIHTITDNYAK
NQQQKKYQEEAIPALRDISISEVNQMFFLAAKELYTKN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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