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Report for CCDS82846.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82846.1 Public Homo sapiens 3 NMNAT3 24 110 108 CCDS HistoryNCBI Gene:349565Re-query CCDS DB by CCDS ID:82846.1Re-query CCDS DB by GeneID:349565See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82846.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000296202.12 ENSP00000296202.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000296202.12Link to Ensembl Protein Viewer:ENSP00000296202.6Re-query CCDS DB by Nucleotide ID:ENST00000296202Re-query CCDS DB by Protein ID:ENSP00000296202
Original member Current member EBI ENST00000704800.1 ENSP00000516041.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000704800.1Link to Ensembl Protein Viewer:ENSP00000516041.1Re-query CCDS DB by Nucleotide ID:ENST00000704800Re-query CCDS DB by Protein ID:ENSP00000516041
Original member Current member NCBI NM_001320511.2 NP_001307440.1 Accepted alive Link to Nucleotide Sequence:NM_001320511.2Link to Protein Sequence:NP_001307440.1Re-query CCDS DB by Nucleotide ID:NM_001320511Re-query CCDS DB by Protein ID:NP_001307440Link to BLAST:NP_001307440.1
Original member Current member NCBI NM_001320512.2 NP_001307441.1 Accepted alive Link to Nucleotide Sequence:NM_001320512.2Link to Protein Sequence:NP_001307441.1Re-query CCDS DB by Nucleotide ID:NM_001320512Re-query CCDS DB by Protein ID:NP_001307441Link to BLAST:NP_001307441.1
Original member Current member NCBI NM_001401600.1 NP_001388529.1 Accepted alive Link to Nucleotide Sequence:NM_001401600.1Link to Protein Sequence:NP_001388529.1Re-query CCDS DB by Nucleotide ID:NM_001401600Re-query CCDS DB by Protein ID:NP_001388529Link to BLAST:NP_001388529.1
Original member Current member NCBI NM_001401601.1 NP_001388530.1 Accepted alive Link to Nucleotide Sequence:NM_001401601.1Link to Protein Sequence:NP_001388530.1Re-query CCDS DB by Nucleotide ID:NM_001401601Re-query CCDS DB by Protein ID:NP_001388530Link to BLAST:NP_001388530.1
Original member Current member NCBI NM_001401602.1 NP_001388531.1 Accepted alive Link to Nucleotide Sequence:NM_001401602.1Link to Protein Sequence:NP_001388531.1Re-query CCDS DB by Nucleotide ID:NM_001401602Re-query CCDS DB by Protein ID:NP_001388531Link to BLAST:NP_001388531.1
Original member Current member NCBI NM_001401603.1 NP_001388532.1 Accepted alive Link to Nucleotide Sequence:NM_001401603.1Link to Protein Sequence:NP_001388532.1Re-query CCDS DB by Nucleotide ID:NM_001401603Re-query CCDS DB by Protein ID:NP_001388532Link to BLAST:NP_001388532.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001307440.1 252 Q96T66-1 252 100% 0 0
NP_001307441.1 252 Q96T66-1 252 100% 0 0
NP_001388529.1 252 Q96T66-1 252 100% 0 0
NP_001388530.1 252 Q96T66-1 252 100% 0 0
NP_001388531.1 252 Q96T66-1 252 100% 0 0
NP_001388532.1 252 Q96T66-1 252 100% 0 0

Chromosomal Locations for CCDS 82846.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 139561010 139561392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 139573598 139573680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 139578872 139579055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 139627616 139627724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (759 nt):
ATGAAGAGCCGAATACCTGTGGTGCTCCTGGCCTGTGGCTCCTTTAACCCCATCACCAACATGCACCTGC
GCATGTTTGAGGTGGCCAGAGATCACCTACACCAAACAGGAATGTACCAGGTCATCCAGGGTATCATCTC
TCCTGTCAACGACACCTATGGGAAGAAAGACCTCGCAGCTTCTCATCACCGAGTGGCCATGGCCCGGCTG
GCCCTGCAGACATCCGACTGGATCCGGGTGGACCCTTGGGAGAGTGAGCAGGCACAGTGGATGGAGACAG
TGAAGGTGCTGAGGCATCATCACAGCAAACTGCTCAGATCTCCACCCCAGATGGAAGGCCCAGACCATGG
CAAGGCACTCTTCTCGACCCCTGCAGCTGTGCCTGAGCTGAAGCTTCTCTGTGGGGCAGACGTCTTGAAG
ACCTTCCAGACCCCCAACCTCTGGAAGGATGCGCACATCCAGGAAATAGTGGAGAAGTTTGGCTTGGTGT
GCGTGGGCCGAGTAGGTCACGACCCAAAAGGTTACATCGCAGAATCTCCCATCCTACGGATGCACCAGCA
CAACATTCACCTGGCCAAGGAGCCTGTGCAGAATGAGATCAGTGCCACATACATCAGGCGAGCCTTGGGC
CAAGGGCAGAGCGTAAAGTACCTGATTCCCGATGCTGTCATCACGTACATCAAGGACCATGGCCTCTACA
CCAAGGGCAGTACCTGGAAAGGCAAAAGCACCCAGAGCACTGAGGGCAAGACAAGCTAG

Translation (252 aa):
MKSRIPVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAASHHRVAMARL
ALQTSDWIRVDPWESEQAQWMETVKVLRHHHSKLLRSPPQMEGPDHGKALFSTPAAVPELKLLCGADVLK
TFQTPNLWKDAHIQEIVEKFGLVCVGRVGHDPKGYIAESPILRMHQHNIHLAKEPVQNEISATYIRRALG
QGQSVKYLIPDAVITYIKDHGLYTKGSTWKGKSTQSTEGKTS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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